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6DHA

Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Hydroxy Pioglitazone (M-IV)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue GFV A 501
ChainResidue
AILE281
AILE341
AMET364
AHIS449
ATYR473
AHOH628
APHE282
AGLY284
ACYS285
AGLN286
ASER289
AHIS323
ATYR327
ALEU330

site_idAC2
Number of Residues12
Detailsbinding site for residue KNA A 502
ChainResidue
ALEU228
AARG288
AMET329
ALEU330
ALEU333
ASER342
AGLU343
AHOH608
AHOH622
AHOH624
AHOH628
AHOH662

site_idAC3
Number of Residues2
Detailsbinding site for residue KNA A 503
ChainResidue
AGLY258
AHOH620

site_idAC4
Number of Residues15
Detailsbinding site for residue GFV B 501
ChainResidue
BILE249
BLEU255
BGLU259
BPHE264
BHIS266
BILE267
BARG280
BILE281
BCYS285
BARG288
BALA292
BILE326
BLEU330
BILE341
BMET348

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsMotif: {"description":"9aaTAD","evidences":[{"source":"PubMed","id":"30468856","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9744270","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2PRG","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"36737649","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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