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6DCC

Structure of methylphosphate capping enzyme methyltransferase domain in complex with 5' end of 7SK RNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0008168molecular_functionmethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue SAH A 701
ChainResidue
ATYR415
AILE475
ALEU479
AGLY558
AASN559
ATYR560
AVAL561
ALEU581
ALEU583
ATRP591
AHOH806
AGLY416
BG5J1
AASN417
ATYR421
ATYR422
AARG433
AGLY451
AASN453
AASP474

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 702
ChainResidue
AARG484
ATHR557
AARG639
AHOH852

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30559425","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6DCB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6DCC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30559425","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAY-2009","submissionDatabase":"PDB data bank","title":"Methyltransferase domain of human bicoid-interacting protein 3 homolog (drosophila).","authoringGroup":["Structural genomics consortium (SGC)"]}},{"source":"PDB","id":"5UNA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6DCB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6DCC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

242199

PDB entries from 2025-09-24

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