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6DB7

Crystal structure of anti-HIV-1 V3 Fab 1334 in complex with a HIV-1 gp120 V3 peptide from MN strain

Functional Information from GO Data
ChainGOidnamespacecontents
P0019031cellular_componentviral envelope
Q0019031cellular_componentviral envelope
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue GOL H 301
ChainResidue
HSER188
HTHR191
HGLN192

site_idAC2
Number of Residues2
Detailsbinding site for residue GOL H 302
ChainResidue
HASP208
IGLN192

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL H 303
ChainResidue
HGLY133
HGLY134
HSER186

site_idAC4
Number of Residues3
Detailsbinding site for residue GOL L 301
ChainResidue
LHIS188
LHOH466
LGLN184

site_idAC5
Number of Residues4
Detailsbinding site for residue GOL L 302
ChainResidue
LLYS149
LASP151
LSER152
LGLU203

site_idAC6
Number of Residues5
Detailsbinding site for residue GOL L 303
ChainResidue
LASP151
LSER152
LSER153
LARG189
LHOH452

site_idAC7
Number of Residues5
Detailsbinding site for residue GOL I 301
ChainResidue
ISER127
ISER128
ILYS129
ISER187
IHOH451

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL M 301
ChainResidue
IVAL181
IHOH412
MSER114
MTHR116
MLEU135
MSER137

site_idAC9
Number of Residues2
Detailsbinding site for residue GOL M 302
ChainResidue
MSER40
MLYS166

site_idAD1
Number of Residues3
Detailsbinding site for residue GOL M 303
ChainResidue
ITHR165
MSER168
MHOH437

site_idAD2
Number of Residues4
Detailsbinding site for residue GOL M 304
ChainResidue
IARG42
MTYR87
MGLY100
MGLY101

site_idAD3
Number of Residues3
Detailsbinding site for residue GOL M 305
ChainResidue
MGLN184
MHIS188
MTYR191

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YSCQVTH
ChainResidueDetails
LTYR191-HIS197
HTYR194-HIS200

225946

PDB entries from 2024-10-09

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