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6D9M

T4-Lysozyme fusion to Geobacter GGDEF

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0009253biological_processpeptidoglycan catabolic process
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0030430cellular_componenthost cell cytoplasm
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0044659biological_processviral release from host cell by cytolysis
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue GTP A 201
ChainResidue
ALYS-147
AHOH511
AHOH559
AVAL69
AARG70
AASP73
AVAL88
ATHR90
AVAL98
AARG101
AHOH495

site_idAC2
Number of Residues16
Detailsbinding site for residue GTP A 202
ChainResidue
ATHR-142
AASN-19
AARG-15
AILE16
AASP19
AARG20
ALYS23
AARG24
AARG27
AACT207
AHOH304
AHOH317
AHOH325
AHOH376
AHOH450
AHOH537

site_idAC3
Number of Residues12
Detailsbinding site for residue GMP A 203
ChainResidue
APHE42
ALYS43
AASN46
AHIS51
AGLY54
ASER55
ALEU58
AGLY80
AASP81
APOP204
AHOH348
AHOH548

site_idAC4
Number of Residues16
Detailsbinding site for residue POP A 204
ChainResidue
AASP38
ALEU39
AASP40
APHE41
APHE42
ALYS43
AASP81
ALYS152
ALYS156
AGMP203
AMG205
AHOH318
AHOH365
AHOH408
AHOH444
AHOH464

site_idAC5
Number of Residues5
Detailsbinding site for residue MG A 205
ChainResidue
AASP38
ALEU39
AASP81
APOP204
AHOH365

site_idAC6
Number of Residues5
Detailsbinding site for residue GOL A 206
ChainResidue
AALA96
AGLU100
ATYR127
AVAL159
AHOH580

site_idAC7
Number of Residues6
Detailsbinding site for residue ACT A 207
ChainResidue
AASN-19
ATHR-21
APRO-20
AARG-18
AGTP202
AHOH455

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
ChainResidueDetails
AGLN-152

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:1892846, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
ChainResidueDetails
AASP-143

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:8266098
ChainResidueDetails
ALEU-131
APHE-59

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000303|PubMed:7831309
ChainResidueDetails
ASER-46
AASN-31

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 921
ChainResidueDetails
AGLN-152proton shuttle (general acid/base)
AASP-143covalent catalysis

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PDB entries from 2024-06-26

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