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6D7G

Structure of 5F3 TCR in complex with HLA-A2/MART-1

Functional Information from GO Data
ChainGOidnamespacecontents
A0000139cellular_componentGolgi membrane
A0001913biological_processT cell mediated cytotoxicity
A0001916biological_processpositive regulation of T cell mediated cytotoxicity
A0002237biological_processresponse to molecule of bacterial origin
A0002474biological_processantigen processing and presentation of peptide antigen via MHC class I
A0002481biological_processantigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent
A0002502biological_processpeptide antigen assembly with MHC class I protein complex
A0002503biological_processpeptide antigen assembly with MHC class II protein complex
A0002726biological_processpositive regulation of T cell cytokine production
A0005198molecular_functionstructural molecule activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005765cellular_componentlysosomal membrane
A0005783cellular_componentendoplasmic reticulum
A0005788cellular_componentendoplasmic reticulum lumen
A0005794cellular_componentGolgi apparatus
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0005925cellular_componentfocal adhesion
A0006826biological_processiron ion transport
A0006879biological_processintracellular iron ion homeostasis
A0006955biological_processimmune response
A0007608biological_processsensory perception of smell
A0007611biological_processlearning or memory
A0009897cellular_componentexternal side of plasma membrane
A0009986cellular_componentcell surface
A0010977biological_processnegative regulation of neuron projection development
A0012507cellular_componentER to Golgi transport vesicle membrane
A0016020cellular_componentmembrane
A0019885biological_processantigen processing and presentation of endogenous peptide antigen via MHC class I
A0019886biological_processantigen processing and presentation of exogenous peptide antigen via MHC class II
A0023026molecular_functionMHC class II protein complex binding
A0030670cellular_componentphagocytic vesicle membrane
A0031901cellular_componentearly endosome membrane
A0031902cellular_componentlate endosome membrane
A0031905cellular_componentearly endosome lumen
A0032092biological_processpositive regulation of protein binding
A0033077biological_processT cell differentiation in thymus
A0034756biological_processregulation of iron ion transport
A0035580cellular_componentspecific granule lumen
A0042026biological_processprotein refolding
A0042605molecular_functionpeptide antigen binding
A0042612cellular_componentMHC class I protein complex
A0042613cellular_componentMHC class II protein complex
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0042824cellular_componentMHC class I peptide loading complex
A0045646biological_processregulation of erythrocyte differentiation
A0048260biological_processpositive regulation of receptor-mediated endocytosis
A0050680biological_processnegative regulation of epithelial cell proliferation
A0050768biological_processnegative regulation of neurogenesis
A0050778biological_processpositive regulation of immune response
A0050870biological_processpositive regulation of T cell activation
A0051289biological_processprotein homotetramerization
A0055038cellular_componentrecycling endosome membrane
A0060586biological_processmulticellular organismal-level iron ion homeostasis
A0070062cellular_componentextracellular exosome
A0071281biological_processcellular response to iron ion
A0071283biological_processcellular response to iron(III) ion
A0071316biological_processcellular response to nicotine
A1900121biological_processnegative regulation of receptor binding
A1900122biological_processpositive regulation of receptor binding
A1904434biological_processpositive regulation of ferrous iron binding
A1904437biological_processpositive regulation of transferrin receptor binding
A1904724cellular_componenttertiary granule lumen
A1990000biological_processamyloid fibril formation
A1990712cellular_componentHFE-transferrin receptor complex
A2000774biological_processpositive regulation of cellular senescence
A2000978biological_processnegative regulation of forebrain neuron differentiation
Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
ChainResidueDetails
ATYR178-HIS184
ATYR1257-HIS1263

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
ChainResidueDetails
AGLN102

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
ChainResidueDetails
AILE101

site_idSWS_FT_FI3
Number of Residues6
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
ChainResidueDetails
ALYS119
ALYS141
ALYS148
ALYS158
ALYS191
ALYS194

site_idSWS_FT_FI4
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:21943705
ChainResidueDetails
ATYR1007
ATHR1073
ATYR1084
ATHR1143
ALYS1146
ATYR1171

site_idSWS_FT_FI5
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:21543847
ChainResidueDetails
ATYR1159
ATYR1116

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Sulfotyrosine => ECO:0000255
ChainResidueDetails
ATYR1059

site_idSWS_FT_FI7
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
ChainResidueDetails
AASN1086

221051

PDB entries from 2024-06-12

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