Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003924 | molecular_function | GTPase activity |
A | 0005047 | molecular_function | signal recognition particle binding |
A | 0005525 | molecular_function | GTP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005886 | cellular_component | plasma membrane |
A | 0006605 | biological_process | protein targeting |
A | 0006612 | biological_process | protein targeting to membrane |
A | 0006614 | biological_process | SRP-dependent cotranslational protein targeting to membrane |
A | 0016020 | cellular_component | membrane |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016887 | molecular_function | ATP hydrolysis activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0003924 | molecular_function | GTPase activity |
B | 0005047 | molecular_function | signal recognition particle binding |
B | 0005525 | molecular_function | GTP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005886 | cellular_component | plasma membrane |
B | 0006605 | biological_process | protein targeting |
B | 0006612 | biological_process | protein targeting to membrane |
B | 0006614 | biological_process | SRP-dependent cotranslational protein targeting to membrane |
B | 0016020 | cellular_component | membrane |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 25 |
Details | binding site for residue GDP A 401 |
Chain | Residue |
A | ASN124 |
A | ASP271 |
A | GLY294 |
A | VAL295 |
A | GLY296 |
A | MG402 |
A | HOH536 |
A | HOH538 |
A | HOH568 |
A | HOH569 |
A | HOH595 |
A | GLY125 |
A | HOH600 |
A | HOH611 |
A | HOH613 |
A | HOH622 |
A | HOH717 |
B | ASN217 |
A | VAL126 |
A | GLY127 |
A | LYS128 |
A | THR129 |
A | THR130 |
A | LYS134 |
A | LYS269 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue MG A 402 |
Chain | Residue |
A | THR129 |
A | GDP401 |
A | HOH568 |
A | HOH569 |
A | HOH585 |
A | HOH748 |
site_id | AC3 |
Number of Residues | 17 |
Details | binding site for residue GDP A 403 |
Chain | Residue |
A | ASP181 |
A | SER184 |
A | PHE187 |
A | ASP188 |
A | LYS221 |
A | VAL225 |
A | LYS228 |
A | HOH505 |
A | HOH507 |
B | ASP181 |
B | SER184 |
B | PHE187 |
B | ASP188 |
B | LYS221 |
B | VAL225 |
B | LYS228 |
B | HOH515 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue EDO A 404 |
Chain | Residue |
A | SER244 |
A | HOH511 |
A | HOH537 |
A | HOH689 |
A | HOH717 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue EDO A 405 |
Chain | Residue |
A | ARG168 |
A | LYS298 |
A | MET299 |
A | HOH619 |
B | ASN211 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue EDO A 406 |
Chain | Residue |
A | GLN285 |
A | PHE286 |
A | GLN287 |
A | HOH668 |
site_id | AC7 |
Number of Residues | 3 |
Details | binding site for residue EDO A 407 |
Chain | Residue |
A | LEU99 |
A | GLU100 |
A | PRO102 |
site_id | AC8 |
Number of Residues | 26 |
Details | binding site for residue GDP B 401 |
Chain | Residue |
A | ASN217 |
B | ASN124 |
B | GLY125 |
B | VAL126 |
B | GLY127 |
B | LYS128 |
B | THR129 |
B | THR130 |
B | LYS134 |
B | LYS269 |
B | ASP271 |
B | GLY294 |
B | VAL295 |
B | GLY296 |
B | GLU297 |
B | MG402 |
B | HOH529 |
B | HOH555 |
B | HOH556 |
B | HOH558 |
B | HOH592 |
B | HOH618 |
B | HOH644 |
B | HOH653 |
B | HOH676 |
B | HOH693 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue MG B 402 |
Chain | Residue |
B | THR129 |
B | GDP401 |
B | HOH555 |
B | HOH556 |
B | HOH585 |
B | HOH746 |
site_id | AD1 |
Number of Residues | 5 |
Details | binding site for residue EDO B 403 |
Chain | Residue |
B | LYS298 |
B | MET299 |
B | HOH700 |
A | ASN211 |
B | ARG168 |
site_id | AD2 |
Number of Residues | 6 |
Details | binding site for residue EDO B 404 |
Chain | Residue |
B | GLY60 |
B | VAL61 |
B | GLU62 |
B | GLN247 |
B | PHE250 |
B | HOH754 |
site_id | AD3 |
Number of Residues | 5 |
Details | binding site for residue EDO B 405 |
Chain | Residue |
B | VAL295 |
B | ASP301 |
B | HOH609 |
B | HOH659 |
B | HOH668 |
site_id | AD4 |
Number of Residues | 5 |
Details | binding site for residue EDO B 406 |
Chain | Residue |
B | LYS31 |
B | ALA56 |
B | HOH527 |
B | HOH633 |
B | HOH818 |
Functional Information from PROSITE/UniProt
site_id | PS00300 |
Number of Residues | 14 |
Details | SRP54 SRP54-type proteins GTP-binding domain signature. PVkYIGVGEkMqdL |
Chain | Residue | Details |
A | PRO289-LEU302 | |