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6CY5

Crystal structure of Signal recognition particle receptor FtsY from Elizabethkingia anophelis in complex with GDP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005047molecular_functionsignal recognition particle binding
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005886cellular_componentplasma membrane
A0006605biological_processprotein targeting
A0006612biological_processprotein targeting to membrane
A0006614biological_processSRP-dependent cotranslational protein targeting to membrane
A0016020cellular_componentmembrane
A0016787molecular_functionhydrolase activity
A0016887molecular_functionATP hydrolysis activity
A0046872molecular_functionmetal ion binding
B0003924molecular_functionGTPase activity
B0005047molecular_functionsignal recognition particle binding
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005886cellular_componentplasma membrane
B0006605biological_processprotein targeting
B0006612biological_processprotein targeting to membrane
B0006614biological_processSRP-dependent cotranslational protein targeting to membrane
B0016020cellular_componentmembrane
B0016787molecular_functionhydrolase activity
B0016887molecular_functionATP hydrolysis activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues25
Detailsbinding site for residue GDP A 401
ChainResidue
AASN124
AASP271
AGLY294
AVAL295
AGLY296
AMG402
AHOH536
AHOH538
AHOH568
AHOH569
AHOH595
AGLY125
AHOH600
AHOH611
AHOH613
AHOH622
AHOH717
BASN217
AVAL126
AGLY127
ALYS128
ATHR129
ATHR130
ALYS134
ALYS269

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 402
ChainResidue
ATHR129
AGDP401
AHOH568
AHOH569
AHOH585
AHOH748

site_idAC3
Number of Residues17
Detailsbinding site for residue GDP A 403
ChainResidue
AASP181
ASER184
APHE187
AASP188
ALYS221
AVAL225
ALYS228
AHOH505
AHOH507
BASP181
BSER184
BPHE187
BASP188
BLYS221
BVAL225
BLYS228
BHOH515

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 404
ChainResidue
ASER244
AHOH511
AHOH537
AHOH689
AHOH717

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO A 405
ChainResidue
AARG168
ALYS298
AMET299
AHOH619
BASN211

site_idAC6
Number of Residues4
Detailsbinding site for residue EDO A 406
ChainResidue
AGLN285
APHE286
AGLN287
AHOH668

site_idAC7
Number of Residues3
Detailsbinding site for residue EDO A 407
ChainResidue
ALEU99
AGLU100
APRO102

site_idAC8
Number of Residues26
Detailsbinding site for residue GDP B 401
ChainResidue
AASN217
BASN124
BGLY125
BVAL126
BGLY127
BLYS128
BTHR129
BTHR130
BLYS134
BLYS269
BASP271
BGLY294
BVAL295
BGLY296
BGLU297
BMG402
BHOH529
BHOH555
BHOH556
BHOH558
BHOH592
BHOH618
BHOH644
BHOH653
BHOH676
BHOH693

site_idAC9
Number of Residues6
Detailsbinding site for residue MG B 402
ChainResidue
BTHR129
BGDP401
BHOH555
BHOH556
BHOH585
BHOH746

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO B 403
ChainResidue
BLYS298
BMET299
BHOH700
AASN211
BARG168

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO B 404
ChainResidue
BGLY60
BVAL61
BGLU62
BGLN247
BPHE250
BHOH754

site_idAD3
Number of Residues5
Detailsbinding site for residue EDO B 405
ChainResidue
BVAL295
BASP301
BHOH609
BHOH659
BHOH668

site_idAD4
Number of Residues5
Detailsbinding site for residue EDO B 406
ChainResidue
BLYS31
BALA56
BHOH527
BHOH633
BHOH818

Functional Information from PROSITE/UniProt
site_idPS00300
Number of Residues14
DetailsSRP54 SRP54-type proteins GTP-binding domain signature. PVkYIGVGEkMqdL
ChainResidueDetails
APRO289-LEU302

227344

PDB entries from 2024-11-13

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