Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6CI7

The structure of YcaO from Methanopyrus kandleri bound with AMPPCP and Mg2+

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0046872molecular_functionmetal ion binding
C0000166molecular_functionnucleotide binding
C0046872molecular_functionmetal ion binding
D0000166molecular_functionnucleotide binding
D0046872molecular_functionmetal ion binding
E0000166molecular_functionnucleotide binding
E0046872molecular_functionmetal ion binding
F0000166molecular_functionnucleotide binding
F0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues23
Detailsbinding site for residue ACP A 500
ChainResidue
AARG13
AALA151
AGLN161
AGLU165
AARG169
AARG248
AGLU252
AMG501
AHOH624
AHOH678
AHOH680
ALYS65
AHOH713
AHOH714
AHOH722
AHOH727
AGLN71
AVAL74
ASER75
AMSE78
AGLU79
AGLU82
ASER150

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
AGLU165
AACP500
AHOH624
AHOH634
AHOH691

site_idAC3
Number of Residues25
Detailsbinding site for residue ACP B 500
ChainResidue
BARG13
BLYS65
BGLN71
BVAL74
BSER75
BMSE78
BGLU79
BGLU82
BSER150
BALA151
BGLU157
BGLN161
BGLU165
BARG169
BARG248
BGLU252
BMG501
BHOH617
BHOH642
BHOH651
BHOH669
BHOH698
BHOH720
BHOH732
BHOH764

site_idAC4
Number of Residues5
Detailsbinding site for residue MG B 501
ChainResidue
BGLU165
BACP500
BHOH617
BHOH642
BHOH653

site_idAC5
Number of Residues22
Detailsbinding site for residue ACP C 500
ChainResidue
CARG13
CLYS65
CGLN71
CVAL74
CSER75
CMSE78
CGLU79
CGLU82
CSER150
CALA151
CGLU157
CGLN161
CGLU165
CARG169
CARG248
CGLU252
CMG501
CHOH605
CHOH623
CHOH634
CHOH638
CHOH659

site_idAC6
Number of Residues5
Detailsbinding site for residue MG C 501
ChainResidue
CGLU165
CACP500
CHOH605
CHOH621
CHOH634

site_idAC7
Number of Residues27
Detailsbinding site for residue ACP D 500
ChainResidue
DARG248
DGLU252
DMG501
DHOH603
DHOH608
DHOH619
DHOH640
DHOH657
DHOH658
DHOH663
DHOH674
DHOH700
DHOH715
DARG13
DLYS65
DGLN71
DVAL74
DSER75
DMSE78
DGLU79
DGLU82
DSER150
DALA151
DGLU157
DGLN161
DGLU165
DARG169

site_idAC8
Number of Residues6
Detailsbinding site for residue MG D 501
ChainResidue
DLEU149
DGLU165
DACP500
DHOH603
DHOH640
DHOH700

site_idAC9
Number of Residues22
Detailsbinding site for residue ACP E 500
ChainResidue
EARG13
ELYS65
EGLN71
EVAL74
ESER75
EMSE78
EGLU79
EGLU82
ESER150
EALA151
EGLN161
EGLU165
EARG169
EARG248
EGLU252
EMG501
EHOH619
EHOH650
EHOH654
EHOH685
EHOH717
EHOH771

site_idAD1
Number of Residues5
Detailsbinding site for residue MG E 501
ChainResidue
EGLU165
EACP500
EHOH619
EHOH632
EHOH685

site_idAD2
Number of Residues26
Detailsbinding site for residue ACP F 500
ChainResidue
FARG13
FLYS65
FGLN71
FVAL74
FSER75
FMSE78
FGLU79
FGLU82
FSER150
FALA151
FGLN161
FGLU165
FARG169
FARG248
FGLU252
FMG501
FHOH605
FHOH634
FHOH636
FHOH642
FHOH655
FHOH682
FHOH699
FHOH711
FHOH751
FHOH757

site_idAD3
Number of Residues7
Detailsbinding site for residue MG F 501
ChainResidue
FLEU149
FGLU165
FACP500
FHOH605
FHOH634
FHOH655
FHOH751

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon