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6CGD

Aminoglycoside Phosphotransferase (2'')-Ia in complex with GMPPNP, Magnesium, and Amikacin

Functional Information from PDB Data
site_idAC1
Number of Residues25
Detailsbinding site for residue GNP A 500
ChainResidue
AILE208
AHIS379
AILE392
AASP393
AAKN600
AMG700
AMG702
AHOH900
AHOH901
AHOH903
AHOH904
ASER214
AHOH906
AHOH921
AHOH1038
AHOH1154
AHOH1206
AHOH1221
AILE224
ALYS226
ATYR237
ATYR274
AGLU276
AILE277
APHE281

site_idAC2
Number of Residues18
Detailsbinding site for residue AKN A 600
ChainResidue
ASER210
AGLY211
ATYR212
AASP374
AASP396
ATYR408
AGLU411
AVAL444
AGLU445
ATYR448
AGLU451
AGNP500
AHOH901
AHOH904
AHOH921
AHOH972
AHOH1601
AHOH1602

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 700
ChainResidue
AHIS379
AASP393
AGNP500
AHOH900
AHOH901

site_idAC4
Number of Residues5
Detailsbinding site for residue MG A 702
ChainResidue
AASP393
AGNP500
AHOH902
AHOH903
AHOH904

site_idAC5
Number of Residues2
Detailsbinding site for residue CL A 802
ChainResidue
AGLN462
AARG469

site_idAC6
Number of Residues24
Detailsbinding site for residue GNP B 500
ChainResidue
BILE208
BSER214
BILE224
BLYS226
BTYR237
BTYR274
BGLU276
BILE277
BPHE281
BHIS379
BILE392
BASP393
BMG700
BMG702
BHOH900
BHOH901
BHOH903
BHOH904
BHOH906
BHOH909
BHOH923
BHOH924
BHOH1057
BHOH1206

site_idAC7
Number of Residues5
Detailsbinding site for residue MG B 700
ChainResidue
BHIS379
BASP393
BGNP500
BHOH900
BHOH901

site_idAC8
Number of Residues5
Detailsbinding site for residue MG B 702
ChainResidue
BASP393
BGNP500
BHOH902
BHOH903
BHOH904

site_idAC9
Number of Residues3
Detailsbinding site for residue CL B 802
ChainResidue
BGLN462
BGLU466
BARG469

site_idAD1
Number of Residues26
Detailsbinding site for residue GNP C 500
ChainResidue
CGLU276
CILE277
CPHE281
CHIS379
CILE392
CASP393
CMG700
CMG702
CHOH900
CHOH901
CHOH903
CHOH904
CHOH906
CHOH921
CHOH923
CHOH1038
CHOH1057
CHOH1206
CHOH1221
CILE208
CSER214
CALA216
CILE224
CLYS226
CTYR237
CTYR274

site_idAD2
Number of Residues5
Detailsbinding site for residue MG C 700
ChainResidue
CHIS379
CASP393
CGNP500
CHOH900
CHOH901

site_idAD3
Number of Residues5
Detailsbinding site for residue MG C 702
ChainResidue
CASP393
CGNP500
CHOH902
CHOH903
CHOH904

site_idAD4
Number of Residues2
Detailsbinding site for residue CL C 802
ChainResidue
CGLN462
CARG469

site_idAD5
Number of Residues24
Detailsbinding site for residue GNP D 500
ChainResidue
DILE208
DSER210
DGLY211
DSER214
DILE224
DLYS226
DTYR237
DTYR274
DILE277
DPHE281
DHIS379
DILE392
DASP393
DAKN600
DMG700
DMG702
DHOH900
DHOH901
DHOH903
DHOH904
DHOH906
DHOH909
DHOH923
DHOH924

site_idAD6
Number of Residues14
Detailsbinding site for residue AKN D 600
ChainResidue
DASP374
DSER376
DASN378
DHIS379
DASP396
DTYR408
DGLU411
DGLU415
DGLU416
DTYR448
DGLU451
DGNP500
DHOH901
DHOH904

site_idAD7
Number of Residues5
Detailsbinding site for residue MG D 700
ChainResidue
DHIS379
DASP393
DGNP500
DHOH900
DHOH901

site_idAD8
Number of Residues5
Detailsbinding site for residue MG D 702
ChainResidue
DASP393
DGNP500
DHOH902
DHOH903
DHOH904

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton acceptor; for phosphotransferase activity => ECO:0000250
ChainResidueDetails
AASP374
BASP374
CASP374
DASP374

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP393
BASP393
CASP393
DASP393

223790

PDB entries from 2024-08-14

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