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6C1Y

mbd of human mecp2 in complex with methylated DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
B0003677molecular_functionDNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for Di-nucleotide DC C 5 and 5CM C 6
ChainResidue
ALYS109
CDG7
DDG7
DDG8
AARG111
ALYS112
ASER113
ASER116
AASP121
ATYR123
AARG133
CDA4

site_idAC2
Number of Residues14
Detailsbinding site for Di-nucleotide 5CM C 6 and DG C 7
ChainResidue
AARG111
ALYS112
ASER113
AGLY114
AARG115
ASER116
AASP121
AARG133
CDC5
CDG8
DDC5
D5CM6
DDG7
DDG8

site_idAC3
Number of Residues8
Detailsbinding site for Di-nucleotide DC D 5 and 5CM D 6
ChainResidue
AARG133
ASER134
BGLN110
BLYS112
CDG7
CDG8
DDA4
DDG7

site_idAC4
Number of Residues11
Detailsbinding site for Di-nucleotide 5CM D 6 and DG D 7
ChainResidue
AARG133
ASER134
BTYR95
BGLN110
BLYS112
BTYR120
CDC5
C5CM6
CDG7
DDC5
DDG8

site_idAC5
Number of Residues9
Detailsbinding site for Di-nucleotide DC E 5 and 5CM E 6
ChainResidue
BARG111
BLYS112
BSER113
BSER116
BASP121
EDA4
EDG7
FDG7
FDG8

site_idAC6
Number of Residues12
Detailsbinding site for Di-nucleotide 5CM E 6 and DG E 7
ChainResidue
BARG111
BLYS112
BSER113
BGLY114
BARG115
BSER116
BASP121
EDC5
EDG8
F5CM6
FDG7
FDG8

site_idAC7
Number of Residues10
Detailsbinding site for Di-nucleotide DC F 5 and 5CM F 6
ChainResidue
AGLN110
ALYS112
BARG133
BSER134
BVAL136
BPHE157
EDG7
EDG8
FDA4
FDG7

site_idAC8
Number of Residues13
Detailsbinding site for Di-nucleotide 5CM F 6 and DG F 7
ChainResidue
ATYR95
AGLN110
ALYS112
ATYR120
BARG133
BSER134
BVAL136
EDC5
E5CM6
EDG7
EDG8
FDC5
FDG8

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER80
BSER80

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648
ChainResidueDetails
ASER116
BSER116

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Omega-N-methylarginine => ECO:0000250|UniProtKB:Q9Z2D6
ChainResidueDetails
AARG162
BARG162

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PDB entries from 2024-09-11

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