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6C0E

Crystal Structure of Isocitrate Dehydrogenase from Legionella pneumophila with bound NADPH with an alpha-ketoglutarate adduct

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004450molecular_functionisocitrate dehydrogenase (NADP+) activity
A0006097biological_processglyoxylate cycle
A0006099biological_processtricarboxylic acid cycle
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0046872molecular_functionmetal ion binding
A0051287molecular_functionNAD binding
B0000287molecular_functionmagnesium ion binding
B0004450molecular_functionisocitrate dehydrogenase (NADP+) activity
B0006097biological_processglyoxylate cycle
B0006099biological_processtricarboxylic acid cycle
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0046872molecular_functionmetal ion binding
B0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues43
Detailsbinding site for residue EE1 A 501
ChainResidue
AILE43
AARG135
AARG159
ATYR166
AASP313
AILE326
AGLU342
ATHR344
AHIS345
AGLY346
ATHR347
ALYS106
AALA348
ALYS350
ATYR351
AVAL357
AASN358
ATYR397
AASP398
AHOH602
AHOH618
AHOH627
APRO108
AHOH671
AHOH672
AHOH702
AHOH760
AHOH775
AHOH877
AHOH894
AHOH931
BLYS236
BASN238
ALEU109
BILE287
BASP289
BGLN294
BARG298
ATHR110
ATHR111
ASER119
AASN121
AARG125

site_idAC2
Number of Residues7
Detailsbinding site for residue GLY A 502
ChainResidue
AVAL21
AASP336
AGLN337
AMET338
AHOH611
AHOH796
AHOH905

site_idAC3
Number of Residues3
Detailsbinding site for residue GLY A 503
ChainResidue
AGLU387
AHOH625
AHOH662

site_idAC4
Number of Residues4
Detailsbinding site for residue GLY A 504
ChainResidue
AALA22
ASER26
ALEU27
AHIS28

site_idAC5
Number of Residues4
Detailsbinding site for residue CL A 505
ChainResidue
ALYS79
ALYS79
ALYS82
ALYS82

site_idAC6
Number of Residues42
Detailsbinding site for residue EE1 B 500
ChainResidue
BHOH757
BHOH805
BHOH824
BHOH835
ALYS236
AASN238
AILE287
AASP289
AGLN294
AARG298
BILE43
BPRO108
BLEU109
BTHR110
BTHR111
BSER119
BASN121
BARG125
BARG135
BARG159
BTYR166
BASP313
BILE326
BGLY327
BGLU342
BTHR344
BHIS345
BGLY346
BTHR347
BALA348
BLYS350
BTYR351
BVAL357
BASN358
BTYR397
BASP398
BHOH601
BHOH620
BHOH627
BHOH660
BHOH661
BHOH668

Functional Information from PROSITE/UniProt
site_idPS00470
Number of Residues20
DetailsIDH_IMDH Isocitrate and isopropylmalate dehydrogenases signature. NLNGDYiSDalAaqv.GGIGI
ChainResidueDetails
AASN309-ILE328

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PDB entries from 2024-06-12

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