6BZ0
1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Acinetobacter baumannii in Complex with FAD.
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004148 | molecular_function | dihydrolipoyl dehydrogenase activity |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016668 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004148 | molecular_function | dihydrolipoyl dehydrogenase activity |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016668 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
C | 0000166 | molecular_function | nucleotide binding |
C | 0004148 | molecular_function | dihydrolipoyl dehydrogenase activity |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0016668 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
C | 0050660 | molecular_function | flavin adenine dinucleotide binding |
D | 0000166 | molecular_function | nucleotide binding |
D | 0004148 | molecular_function | dihydrolipoyl dehydrogenase activity |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0016668 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
D | 0050660 | molecular_function | flavin adenine dinucleotide binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 41 |
Details | binding site for residue FAD A 501 |
Chain | Residue |
A | ILE10 |
A | GLY46 |
A | THR47 |
A | CYS48 |
A | GLY52 |
A | CYS53 |
A | LYS57 |
A | GLY119 |
A | THR120 |
A | GLY121 |
A | ALA149 |
A | GLY11 |
A | SER150 |
A | GLY151 |
A | SER152 |
A | SER170 |
A | ILE191 |
A | ARG278 |
A | TYR281 |
A | GLY317 |
A | ASP318 |
A | MET324 |
A | GLY13 |
A | LEU325 |
A | ALA326 |
A | HIS327 |
A | ALA329 |
A | TYR357 |
A | HOH648 |
A | HOH657 |
A | HOH663 |
A | HOH669 |
A | HOH713 |
A | PRO14 |
B | HIS450 |
B | HOH686 |
A | GLY15 |
A | ILE33 |
A | GLU34 |
A | LYS35 |
A | ARG36 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue CL A 502 |
Chain | Residue |
A | SER170 |
A | ARG278 |
A | HOH732 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue CL A 503 |
Chain | Residue |
A | VAL168 |
A | ASP169 |
A | GLY172 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue CL A 504 |
Chain | Residue |
A | LYS221 |
A | GLU370 |
A | HOH676 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue MG A 505 |
Chain | Residue |
A | HOH731 |
A | HOH748 |
A | HOH920 |
D | HOH635 |
D | HOH881 |
D | HOH888 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue MG A 506 |
Chain | Residue |
A | HOH641 |
A | HOH838 |
A | HOH860 |
A | HOH915 |
A | HOH918 |
A | HOH937 |
site_id | AC7 |
Number of Residues | 39 |
Details | binding site for residue FAD B 501 |
Chain | Residue |
B | HOH650 |
B | HOH705 |
A | HIS450 |
A | HOH753 |
B | ILE10 |
B | GLY11 |
B | GLY13 |
B | PRO14 |
B | GLY15 |
B | ILE33 |
B | GLU34 |
B | LYS35 |
B | ARG36 |
B | GLY46 |
B | THR47 |
B | CYS48 |
B | GLY52 |
B | CYS53 |
B | LYS57 |
B | GLY119 |
B | THR120 |
B | GLY121 |
B | ALA149 |
B | SER150 |
B | GLY151 |
B | SER152 |
B | SER170 |
B | ILE191 |
B | ARG278 |
B | TYR281 |
B | GLY317 |
B | ASP318 |
B | MET324 |
B | LEU325 |
B | ALA326 |
B | HIS327 |
B | ALA329 |
B | TYR357 |
B | HOH637 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue CL B 502 |
Chain | Residue |
B | LEU216 |
B | PRO217 |
B | MET218 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue CL B 503 |
Chain | Residue |
B | GLU296 |
B | ARG297 |
B | GLY298 |
B | HOH625 |
site_id | AD1 |
Number of Residues | 3 |
Details | binding site for residue CL B 504 |
Chain | Residue |
B | ASP220 |
B | LYS221 |
B | GLU370 |
site_id | AD2 |
Number of Residues | 39 |
Details | binding site for residue FAD C 501 |
Chain | Residue |
C | ILE10 |
C | GLY11 |
C | GLY13 |
C | PRO14 |
C | GLY15 |
C | ILE33 |
C | GLU34 |
C | LYS35 |
C | ARG36 |
C | GLY46 |
C | THR47 |
C | CYS48 |
C | GLY52 |
C | CYS53 |
C | LYS57 |
C | GLY119 |
C | THR120 |
C | GLY121 |
C | ALA149 |
C | SER150 |
C | GLY151 |
C | SER152 |
C | SER170 |
C | ILE191 |
C | ARG278 |
C | TYR281 |
C | GLY317 |
C | ASP318 |
C | MET324 |
C | LEU325 |
C | ALA326 |
C | TYR357 |
C | HOH641 |
C | HOH649 |
C | HOH657 |
C | HOH666 |
C | HOH727 |
D | HIS450 |
D | HOH676 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue CL C 502 |
Chain | Residue |
C | SER170 |
C | ILE191 |
C | ARG278 |
C | HOH707 |
site_id | AD4 |
Number of Residues | 4 |
Details | binding site for residue CL C 503 |
Chain | Residue |
C | VAL162 |
C | GLN164 |
C | ASP169 |
C | GLY172 |
site_id | AD5 |
Number of Residues | 1 |
Details | binding site for residue CL C 504 |
Chain | Residue |
C | MET218 |
site_id | AD6 |
Number of Residues | 3 |
Details | binding site for residue CL C 505 |
Chain | Residue |
C | LYS221 |
C | GLU370 |
C | HOH724 |
site_id | AD7 |
Number of Residues | 40 |
Details | binding site for residue FAD D 501 |
Chain | Residue |
C | HIS450 |
C | HOH684 |
D | ILE10 |
D | GLY11 |
D | GLY13 |
D | PRO14 |
D | GLY15 |
D | GLU34 |
D | LYS35 |
D | ARG36 |
D | GLY46 |
D | THR47 |
D | CYS48 |
D | GLY52 |
D | CYS53 |
D | LYS57 |
D | GLY119 |
D | THR120 |
D | GLY121 |
D | ALA149 |
D | SER150 |
D | GLY151 |
D | SER152 |
D | SER170 |
D | ILE191 |
D | ARG278 |
D | TYR281 |
D | GLY317 |
D | ASP318 |
D | MET324 |
D | LEU325 |
D | ALA326 |
D | HIS327 |
D | ALA329 |
D | TYR357 |
D | HOH606 |
D | HOH703 |
D | HOH704 |
D | HOH709 |
D | HOH727 |
site_id | AD8 |
Number of Residues | 3 |
Details | binding site for residue CL D 502 |
Chain | Residue |
D | LYS221 |
D | GLU370 |
D | HOH790 |
Functional Information from PROSITE/UniProt
site_id | PS00076 |
Number of Residues | 11 |
Details | PYRIDINE_REDOX_1 Pyridine nucleotide-disulphide oxidoreductases class-I active site. GGtCLnvGCIP |
Chain | Residue | Details |
A | GLY45-PRO55 |
site_id | PS00098 |
Number of Residues | 19 |
Details | THIOLASE_1 Thiolases acyl-enzyme intermediate signature. VNDhCATSVeGVyaigdlV |
Chain | Residue | Details |
A | VAL302-VAL320 |