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6BSJ

Structure of HIV-1 RT complexed with an RNA/DNA hybrid sequence non-preferred for RNA hydrolysis

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue EFZ A 601
ChainResidue
ALYS101
ALYS103
AVAL179
ATYR181
ATYR188
AGLY190
ATRP229
ALEU234
AHIS235

site_idAC2
Number of Residues4
Detailsbinding site for residue CA A 602
ChainResidue
AASP443
AGLY444
AGLU478
AASP498

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL A 603
ChainResidue
ALYS20
APRO55
AASN57

site_idAC4
Number of Residues2
Detailsbinding site for residue GOL A 604
ChainResidue
APRO4
ATRP212

site_idAC5
Number of Residues1
Detailsbinding site for residue GOL D 101
ChainResidue
DDT18

site_idAC6
Number of Residues2
Detailsbinding site for residue GOL D 102
ChainResidue
DDG21
DDG22

site_idAC7
Number of Residues3
Detailsbinding site for residue TAM R 101
ChainResidue
DDG6
RG22
RG23

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
BASP110
BASP185
BASP186

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
BTRP401
BTRP414

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
BPHE440
AASP549

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
ATRP401
ATRP414

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
APHE440

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 175
ChainResidueDetails

218853

PDB entries from 2024-04-24

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