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6BOG

Crystal structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription

Replaces:  3DMQ
Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003677molecular_functionDNA binding
A0004386molecular_functionhelicase activity
A0005524molecular_functionATP binding
A0006355biological_processregulation of DNA-templated transcription
A0016787molecular_functionhydrolase activity
A0016817molecular_functionhydrolase activity, acting on acid anhydrides
B0000166molecular_functionnucleotide binding
B0003677molecular_functionDNA binding
B0004386molecular_functionhelicase activity
B0005524molecular_functionATP binding
B0006355biological_processregulation of DNA-templated transcription
B0016787molecular_functionhydrolase activity
B0016817molecular_functionhydrolase activity, acting on acid anhydrides
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue SO4 A 1001
ChainResidue
AGLU178
AVAL179
AGLY180
ALEU181
AGLY182
ALYS183

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 1002
ChainResidue
AARG570
AARG596
APHE534
AARG543
AGLY569

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 1003
ChainResidue
ATYR130
AGLU857
APHE858

site_idAC4
Number of Residues7
Detailsbinding site for residue SO4 B 1001
ChainResidue
BGLU178
BVAL179
BGLY180
BLEU181
BGLY182
BLYS183
BTHR184

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 B 1002
ChainResidue
BPHE534
BARG543
BGLY569
BARG570
BARG596

site_idAC6
Number of Residues3
Detailsbinding site for residue SO4 B 1003
ChainResidue
BTYR130
BLYS134
BARG842

site_idAC7
Number of Residues1
Detailsbinding site for residue SO4 B 1004
ChainResidue
BILE540

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsMotif: {"description":"DEAH box"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01821","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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