6BOG
Crystal structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription
Replaces: 3DMQFunctional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0004386 | molecular_function | helicase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0006281 | biological_process | DNA repair |
| A | 0006338 | biological_process | chromatin remodeling |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016817 | molecular_function | hydrolase activity, acting on acid anhydrides |
| A | 0031297 | biological_process | replication fork processing |
| A | 0140658 | molecular_function | ATP-dependent chromatin remodeler activity |
| B | 0003677 | molecular_function | DNA binding |
| B | 0004386 | molecular_function | helicase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0006281 | biological_process | DNA repair |
| B | 0006338 | biological_process | chromatin remodeling |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016817 | molecular_function | hydrolase activity, acting on acid anhydrides |
| B | 0031297 | biological_process | replication fork processing |
| B | 0140658 | molecular_function | ATP-dependent chromatin remodeler activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 A 1001 |
| Chain | Residue |
| A | GLU178 |
| A | VAL179 |
| A | GLY180 |
| A | LEU181 |
| A | GLY182 |
| A | LYS183 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 1002 |
| Chain | Residue |
| A | ARG570 |
| A | ARG596 |
| A | PHE534 |
| A | ARG543 |
| A | GLY569 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 A 1003 |
| Chain | Residue |
| A | TYR130 |
| A | GLU857 |
| A | PHE858 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 B 1001 |
| Chain | Residue |
| B | GLU178 |
| B | VAL179 |
| B | GLY180 |
| B | LEU181 |
| B | GLY182 |
| B | LYS183 |
| B | THR184 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 B 1002 |
| Chain | Residue |
| B | PHE534 |
| B | ARG543 |
| B | GLY569 |
| B | ARG570 |
| B | ARG596 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 B 1003 |
| Chain | Residue |
| B | TYR130 |
| B | LYS134 |
| B | ARG842 |
| site_id | AC7 |
| Number of Residues | 1 |
| Details | binding site for residue SO4 B 1004 |
| Chain | Residue |
| B | ILE540 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01821 |
| Chain | Residue | Details |
| A | ASP177 | |
| B | ASP177 |
