6BEK
Structure of sIHF bound to an 8bp palindromic DNA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0009295 | cellular_component | nucleoid |
| A | 0030261 | biological_process | chromosome condensation |
| D | 0003676 | molecular_function | nucleic acid binding |
| D | 0003677 | molecular_function | DNA binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006351 | biological_process | DNA-templated transcription |
| D | 0009295 | cellular_component | nucleoid |
| D | 0030261 | biological_process | chromosome condensation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue K A 201 |
| Chain | Residue |
| A | GLU62 |
| A | LEU64 |
| A | VAL67 |
| A | HOH330 |
| E | DA6 |
| E | HOH121 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue K D 201 |
| Chain | Residue |
| D | LEU64 |
| D | VAL67 |
| D | HOH318 |
| B | DG4 |
| B | HOH121 |
| D | GLU62 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 24 |
| Details | Region: {"description":"Lid, binds DNA","evidences":[{"source":"PubMed","id":"23427309","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31376411","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 14 |
| Details | Motif: {"description":"H2TH motif, binds DNA","evidences":[{"source":"PubMed","id":"23427309","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31376411","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31376411","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6BEK","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23427309","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4ITQ","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"23427309","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31376411","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4ITQ","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6BEK","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
