6AZ0
Mitochondrial ATPase Protease YME1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004176 | molecular_function | ATP-dependent peptidase activity |
| A | 0004222 | molecular_function | metalloendopeptidase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0006508 | biological_process | proteolysis |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| B | 0004176 | molecular_function | ATP-dependent peptidase activity |
| B | 0004222 | molecular_function | metalloendopeptidase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0006508 | biological_process | proteolysis |
| B | 0016887 | molecular_function | ATP hydrolysis activity |
| C | 0004176 | molecular_function | ATP-dependent peptidase activity |
| C | 0004222 | molecular_function | metalloendopeptidase activity |
| C | 0005524 | molecular_function | ATP binding |
| C | 0006508 | biological_process | proteolysis |
| C | 0016887 | molecular_function | ATP hydrolysis activity |
| D | 0004176 | molecular_function | ATP-dependent peptidase activity |
| D | 0004222 | molecular_function | metalloendopeptidase activity |
| D | 0005524 | molecular_function | ATP binding |
| D | 0006508 | biological_process | proteolysis |
| D | 0016887 | molecular_function | ATP hydrolysis activity |
| E | 0004176 | molecular_function | ATP-dependent peptidase activity |
| E | 0004222 | molecular_function | metalloendopeptidase activity |
| E | 0005524 | molecular_function | ATP binding |
| E | 0006508 | biological_process | proteolysis |
| E | 0016887 | molecular_function | ATP hydrolysis activity |
| F | 0004176 | molecular_function | ATP-dependent peptidase activity |
| F | 0004222 | molecular_function | metalloendopeptidase activity |
| F | 0005524 | molecular_function | ATP binding |
| F | 0006508 | biological_process | proteolysis |
| F | 0016887 | molecular_function | ATP hydrolysis activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 13 |
| Details | binding site for residue ATP A 801 |
| Chain | Residue |
| A | CYS284 |
| A | ALA485 |
| A | MG803 |
| B | ARG435 |
| B | ARG438 |
| A | GLY324 |
| A | THR325 |
| A | GLY326 |
| A | LYS327 |
| A | THR328 |
| A | LEU329 |
| A | HIS460 |
| A | GLY484 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue ZN A 802 |
| Chain | Residue |
| A | HIS540 |
| A | HIS544 |
| A | ASP618 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | binding site for residue MG A 803 |
| Chain | Residue |
| A | THR328 |
| A | ATP801 |
| site_id | AC4 |
| Number of Residues | 15 |
| Details | binding site for residue ATP B 801 |
| Chain | Residue |
| B | ASP282 |
| B | CYS284 |
| B | PRO323 |
| B | GLY324 |
| B | THR325 |
| B | GLY326 |
| B | LYS327 |
| B | THR328 |
| B | LEU329 |
| B | HIS460 |
| B | GLY484 |
| B | ALA485 |
| B | MG803 |
| C | ARG435 |
| C | ARG438 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue ZN B 802 |
| Chain | Residue |
| B | HIS540 |
| B | HIS544 |
| B | ASP618 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue MG B 803 |
| Chain | Residue |
| B | THR328 |
| B | ASP380 |
| B | ATP801 |
| site_id | AC7 |
| Number of Residues | 14 |
| Details | binding site for residue ATP C 801 |
| Chain | Residue |
| C | ASP282 |
| C | CYS284 |
| C | PRO323 |
| C | GLY324 |
| C | THR325 |
| C | GLY326 |
| C | LYS327 |
| C | THR328 |
| C | LEU329 |
| C | ASN424 |
| C | HIS460 |
| C | MG803 |
| D | ASP409 |
| D | ARG438 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue ZN C 802 |
| Chain | Residue |
| C | HIS540 |
| C | HIS544 |
| C | ASP618 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | binding site for residue MG C 803 |
| Chain | Residue |
| C | THR328 |
| C | ASP380 |
| C | ATP801 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue ZN D 801 |
| Chain | Residue |
| D | HIS540 |
| D | HIS544 |
| D | ASP618 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue MG D 802 |
| Chain | Residue |
| D | THR328 |
| D | ASP380 |
| D | ATP803 |
| site_id | AD3 |
| Number of Residues | 14 |
| Details | binding site for residue ATP D 803 |
| Chain | Residue |
| D | ASP282 |
| D | CYS284 |
| D | PRO323 |
| D | GLY324 |
| D | THR325 |
| D | GLY326 |
| D | LYS327 |
| D | THR328 |
| D | LEU329 |
| D | ASN424 |
| D | HIS460 |
| D | MG802 |
| E | ASP409 |
| E | ARG438 |
| site_id | AD4 |
| Number of Residues | 12 |
| Details | binding site for residue ADP E 801 |
| Chain | Residue |
| E | ASP282 |
| E | VAL283 |
| E | CYS284 |
| E | GLY324 |
| E | THR325 |
| E | GLY326 |
| E | LYS327 |
| E | THR328 |
| E | LEU329 |
| E | HIS460 |
| E | GLY484 |
| E | ALA485 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue ZN E 802 |
| Chain | Residue |
| E | HIS540 |
| E | HIS544 |
| E | ASP618 |
| site_id | AD6 |
| Number of Residues | 3 |
| Details | binding site for residue ZN F 801 |
| Chain | Residue |
| F | HIS540 |
| F | HIS544 |
| F | ASP618 |
Functional Information from PROSITE/UniProt
| site_id | PS00674 |
| Number of Residues | 19 |
| Details | AAA AAA-protein family signature. IiIIgATNfpeaLDkALt.R |
| Chain | Residue | Details |
| A | ILE417-ARG435 |
