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6AX3

Complex structure of JMJD5 and Symmetric Dimethyl-Arginine (SDMA)

Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue 2MR A 501
ChainResidue
AGLU238
AZN503
AHOH614
AHOH667
AGLN275
ATRP310
AILE317
ASER318
AHIS321
AASP323
ATRP414
AAKG502

site_idAC2
Number of Residues14
Detailsbinding site for residue AKG A 502
ChainResidue
ATYR272
ATRP310
ASER318
AHIS321
AASP323
AASN327
ALYS336
AHIS400
AVAL402
ASER412
ATRP414
A2MR501
AZN503
AHOH621

site_idAC3
Number of Residues5
Detailsbinding site for residue ZN A 503
ChainResidue
AHIS321
AASP323
AHIS400
A2MR501
AAKG502

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues145
DetailsDomain: {"description":"JmjC","evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"29459673","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22851697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29459673","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29563586","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24100311","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"3UYJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GJZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4QU1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FBJ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"22851697","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"24100311","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"4GJY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GJZ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22851697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29459673","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29563586","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3UYJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GJZ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

238582

PDB entries from 2025-07-09

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