6AX3
Complex structure of JMJD5 and Symmetric Dimethyl-Arginine (SDMA)
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 12 |
Details | binding site for residue 2MR A 501 |
Chain | Residue |
A | GLU238 |
A | ZN503 |
A | HOH614 |
A | HOH667 |
A | GLN275 |
A | TRP310 |
A | ILE317 |
A | SER318 |
A | HIS321 |
A | ASP323 |
A | TRP414 |
A | AKG502 |
site_id | AC2 |
Number of Residues | 14 |
Details | binding site for residue AKG A 502 |
Chain | Residue |
A | TYR272 |
A | TRP310 |
A | SER318 |
A | HIS321 |
A | ASP323 |
A | ASN327 |
A | LYS336 |
A | HIS400 |
A | VAL402 |
A | SER412 |
A | TRP414 |
A | 2MR501 |
A | ZN503 |
A | HOH621 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue ZN A 503 |
Chain | Residue |
A | HIS321 |
A | ASP323 |
A | HIS400 |
A | 2MR501 |
A | AKG502 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 145 |
Details | Domain: {"description":"JmjC","evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"29459673","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"22851697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29459673","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29563586","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24100311","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"3UYJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GJZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4QU1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FBJ","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"22851697","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"24100311","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"4GJY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GJZ","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"22851697","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29459673","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29563586","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3UYJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4GJZ","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |