6AX3
Complex structure of JMJD5 and Symmetric Dimethyl-Arginine (SDMA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-02 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.456, 64.706, 77.155 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.637 - 2.250 |
R-factor | 0.2114 |
Rwork | 0.206 |
R-free | 0.25910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fbj |
RMSD bond length | 0.009 |
RMSD bond angle | 1.182 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 41.640 |
High resolution limit [Å] | 2.250 |
Number of reflections | 11947 |
<I/σ(I)> | 14.6 |
Completeness [%] | 97.0 |
Redundancy | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.1M HEPES pH 7.0 8% PEG 3350 |