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6AFK

Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
A0052906molecular_functiontRNA (guanine(37)-N1)-methyltransferase activity
B0005737cellular_componentcytoplasm
B0006400biological_processtRNA modification
B0008033biological_processtRNA processing
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
B0052906molecular_functiontRNA (guanine(37)-N1)-methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues22
Detailsbinding site for residue SAM A 301
ChainResidue
ATYR91
AILE138
AGLY139
ATYR141
ALEU143
AGLY145
AGLY146
APRO149
BASP169
BASP174
BSER175
ALEU92
BASP182
BHIS185
BHOH405
ASER93
APRO94
AGLN95
AGLY118
ATYR120
AGLU121
ASER137

site_idAC2
Number of Residues14
Detailsbinding site for residue 9WO B 301
ChainResidue
AARG159
BTYR91
BTYR120
BGLU121
BGLY122
BSER137
BILE138
BGLY139
BTYR141
BVAL142
BLEU143
BGLY145
BPRO149
BHOH411

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00605
ChainResidueDetails
AGLY118
AILE138
BGLY118
BILE138

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PDB entries from 2024-07-17

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