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6AAO

Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with TCO*Lys

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0005524molecular_functionATP binding
A0043039biological_processtRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
AATP504
AHOH647
AHOH710
AHOH740
AHOH762

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 502
ChainResidue
AHOH634
AHOH751
AGLU396
ASER399
AMG503
AATP504

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 503
ChainResidue
AGLU207
AGLU396
AMG502
AATP504
AHOH634
AHOH748

site_idAC4
Number of Residues27
Detailsbinding site for residue ATP A 504
ChainResidue
AGLU207
AARG330
AGLU332
AHIS338
ALEU339
APHE342
AMET344
AGLU396
ALEU397
ASER398
ASER399
AGLY421
AGLY423
AARG426
AMG501
AMG502
AMG503
A9U0505
AHOH615
AHOH634
AHOH647
AHOH710
AHOH740
AHOH751
AHOH755
AHOH762
AHOH772

site_idAC5
Number of Residues17
Detailsbinding site for residue 9U0 A 505
ChainResidue
AALA302
ALEU305
AALA306
AMET344
AASN346
ACYS348
APHE384
ASER399
AASP408
AILE413
ATRP417
AGLY419
AALA420
AGLY421
AATP504
AHOH637
AHOH745

site_idAC6
Number of Residues6
Detailsbinding site for residue K A 506
ChainResidue
AASN203
APRO204
AASP206
AHOH606
AHOH608
AHOH842

site_idAC7
Number of Residues2
Detailsbinding site for residue K A 507
ChainResidue
AGLU341
AARG442

site_idAC8
Number of Residues8
Detailsbinding site for residue PEG A 508
ChainResidue
ASER333
AASP334
AGLY335
ALYS336
AGLU337
AHIS338
AHOH768
AHOH889

223532

PDB entries from 2024-08-07

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