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6AAD

Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with mTmdZLys

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0005524molecular_functionATP binding
A0043039biological_processtRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
AATP504
AHOH635
AHOH708
AHOH724
AHOH768

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 502
ChainResidue
AHOH642
AHOH746
AGLU396
ASER399
AMG503
AATP504

site_idAC3
Number of Residues8
Detailsbinding site for residue MG A 503
ChainResidue
AGLU207
AGLU396
AMG502
AATP504
AHOH604
AHOH642
AHOH714
AHOH747

site_idAC4
Number of Residues30
Detailsbinding site for residue ATP A 504
ChainResidue
AGLU207
AARG330
AGLU332
AHIS338
ALEU339
APHE342
AMET344
AGLU396
ALEU397
ASER398
ASER399
AGLY421
AGLY423
AARG426
AMG501
AMG502
AMG503
A9TU505
AHOH604
AHOH635
AHOH642
AHOH664
AHOH708
AHOH724
AHOH746
AHOH747
AHOH766
AHOH768
AHOH773
AHOH797

site_idAC5
Number of Residues20
Detailsbinding site for residue 9TU A 505
ChainResidue
AMET276
AALA302
AALA306
ALEU309
AARG330
AMET344
AASN346
ACYS348
APHE384
ASER399
AILE405
ALEU407
AASP408
ATRP411
ATRP417
AGLY419
AGLY421
AATP504
AHOH620
AHOH770

site_idAC6
Number of Residues7
Detailsbinding site for residue K A 506
ChainResidue
ALEU202
AASN203
APRO204
AASP206
AHOH611
AHOH713
AHOH840

site_idAC7
Number of Residues3
Detailsbinding site for residue K A 507
ChainResidue
AGLU341
AARG442
AHOH689

218853

PDB entries from 2024-04-24

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