6AAD
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with mTmdZLys
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL26B2 |
| Synchrotron site | SPring-8 |
| Beamline | BL26B2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-11-28 |
| Detector | RAYONIX MX-225 |
| Wavelength(s) | 1 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 100.917, 43.782, 72.475 |
| Unit cell angles | 90.00, 119.05, 90.00 |
Refinement procedure
| Resolution | 35.019 - 1.444 |
| R-factor | 0.1716 |
| Rwork | 0.171 |
| R-free | 0.19540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2zim |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.374 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.480 |
| High resolution limit [Å] | 1.440 | 1.440 |
| Rmeas | 0.074 | |
| Rpim | 0.027 | 0.283 |
| Number of reflections | 48373 | 2317 |
| <I/σ(I)> | 34.2 | |
| Completeness [%] | 97.4 | |
| Redundancy | 7.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 281 | Tris-HCl buffer (pH 8.5),PEG 200, KCl, MgCl2, sodium citrate |
