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6A8B

Ribokinase from Leishmania donovani with AMPPCP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004747molecular_functionribokinase activity
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006014biological_processD-ribose metabolic process
A0016301molecular_functionkinase activity
A0019303biological_processD-ribose catabolic process
A0046835biological_processcarbohydrate phosphorylation
A0046872molecular_functionmetal ion binding
B0004747molecular_functionribokinase activity
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0006014biological_processD-ribose metabolic process
B0016301molecular_functionkinase activity
B0019303biological_processD-ribose catabolic process
B0046835biological_processcarbohydrate phosphorylation
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue ACP A 401
ChainResidue
ATHR245
AASN302
AALA305
AHOH501
AHOH509
AHOH533
AHOH535
AHOH559
AGLY247
AALA248
AGLY250
ALYS266
ATHR273
ATHR274
AALA276
AGLY277

site_idAC2
Number of Residues10
Detailsbinding site for residue GOL A 402
ChainResidue
ASER44
AVAL45
ASER46
APHE47
BCYS125
BPRO126
BASN127
BASN130
BGLU323
BHOH536

site_idAC3
Number of Residues8
Detailsbinding site for residue GOL A 403
ChainResidue
AASP27
AGLY52
AGLY53
ALYS54
AASN57
ATHR314
AHOH503
AHOH527

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL A 404
ChainResidue
AASN159
AILE161
AGLU192
AHOH570

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 405
ChainResidue
AALA4
AARG5
AARG100

site_idAC6
Number of Residues3
Detailsbinding site for residue CL A 406
ChainResidue
AGLY50
APHE51
AHOH545

site_idAC7
Number of Residues2
Detailsbinding site for residue CL A 407
ChainResidue
ASER105
AASN127

site_idAC8
Number of Residues3
Detailsbinding site for residue NA A 408
ChainResidue
APRO162
AHOH530
AHOH592

site_idAC9
Number of Residues5
Detailsbinding site for residue NA A 409
ChainResidue
AALA67
AGLY92
AGLU135
AHOH530
AHOH575

site_idAD1
Number of Residues6
Detailsbinding site for residue NA A 410
ChainResidue
AASP272
ASER308
AARG311
ASER317
AHOH511
AHOH555

site_idAD2
Number of Residues17
Detailsbinding site for residue ACP B 401
ChainResidue
BTHR245
BGLY247
BALA248
BGLY250
BLYS266
BALA270
BTHR273
BALA276
BGLY277
BPHE280
BASN302
BALA305
BHOH502
BHOH504
BHOH505
BHOH514
BHOH544

site_idAD3
Number of Residues1
Detailsbinding site for residue CL B 402
ChainResidue
BARG64

site_idAD4
Number of Residues3
Detailsbinding site for residue CL B 403
ChainResidue
BSER104
BSER105
BASN127

site_idAD5
Number of Residues3
Detailsbinding site for residue CL B 404
ChainResidue
BPHE51
BHOH535
BHOH554

site_idAD6
Number of Residues3
Detailsbinding site for residue CL B 405
ChainResidue
BALA4
BARG5
BARG100

site_idAD7
Number of Residues4
Detailsbinding site for residue NA B 406
ChainResidue
BALA67
BGLY92
BGLU135
BHOH522

site_idAD8
Number of Residues2
Detailsbinding site for residue NA B 407
ChainResidue
BPRO162
BHOH522

site_idAD9
Number of Residues6
Detailsbinding site for residue NA B 408
ChainResidue
BASP272
BSER308
BARG311
BSER317
BHOH512
BHOH553

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PDB entries from 2024-07-24

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