6A4U
The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004322 | molecular_function | ferroxidase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006826 | biological_process | iron ion transport |
A | 0006879 | biological_process | intracellular iron ion homeostasis |
A | 0006880 | biological_process | intracellular sequestering of iron ion |
A | 0008198 | molecular_function | ferrous iron binding |
A | 0008199 | molecular_function | ferric iron binding |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0004322 | molecular_function | ferroxidase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006826 | biological_process | iron ion transport |
B | 0006879 | biological_process | intracellular iron ion homeostasis |
B | 0006880 | biological_process | intracellular sequestering of iron ion |
B | 0008198 | molecular_function | ferrous iron binding |
B | 0008199 | molecular_function | ferric iron binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0004322 | molecular_function | ferroxidase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006826 | biological_process | iron ion transport |
C | 0006879 | biological_process | intracellular iron ion homeostasis |
C | 0006880 | biological_process | intracellular sequestering of iron ion |
C | 0008198 | molecular_function | ferrous iron binding |
C | 0008199 | molecular_function | ferric iron binding |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0046872 | molecular_function | metal ion binding |
D | 0004322 | molecular_function | ferroxidase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0006826 | biological_process | iron ion transport |
D | 0006879 | biological_process | intracellular iron ion homeostasis |
D | 0006880 | biological_process | intracellular sequestering of iron ion |
D | 0008198 | molecular_function | ferrous iron binding |
D | 0008199 | molecular_function | ferric iron binding |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0046872 | molecular_function | metal ion binding |
E | 0004322 | molecular_function | ferroxidase activity |
E | 0005737 | cellular_component | cytoplasm |
E | 0005829 | cellular_component | cytosol |
E | 0006826 | biological_process | iron ion transport |
E | 0006879 | biological_process | intracellular iron ion homeostasis |
E | 0006880 | biological_process | intracellular sequestering of iron ion |
E | 0008198 | molecular_function | ferrous iron binding |
E | 0008199 | molecular_function | ferric iron binding |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0046872 | molecular_function | metal ion binding |
F | 0004322 | molecular_function | ferroxidase activity |
F | 0005737 | cellular_component | cytoplasm |
F | 0005829 | cellular_component | cytosol |
F | 0006826 | biological_process | iron ion transport |
F | 0006879 | biological_process | intracellular iron ion homeostasis |
F | 0006880 | biological_process | intracellular sequestering of iron ion |
F | 0008198 | molecular_function | ferrous iron binding |
F | 0008199 | molecular_function | ferric iron binding |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | binding site for residue EDO A 201 |
Chain | Residue |
A | TYR31 |
A | PHE51 |
A | SER55 |
A | GLU60 |
A | GLU106 |
A | SER143 |
A | HOH1029 |
A | HOH1059 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue EDO A 202 |
Chain | Residue |
A | LYS145 |
A | ASP149 |
A | HOH1060 |
A | HOH1067 |
A | HOH1148 |
A | GLU39 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue EDO A 203 |
Chain | Residue |
A | PHE51 |
A | GLU54 |
A | SER55 |
A | LYS146 |
A | HOH1059 |
A | HOH1117 |
site_id | AC4 |
Number of Residues | 8 |
Details | binding site for residue EDO A 204 |
Chain | Residue |
A | GLN82 |
A | HOH1028 |
A | HOH1039 |
D | GLN82 |
F | ASN22 |
F | TYR26 |
F | GLN82 |
F | ALA84 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue EDO A 205 |
Chain | Residue |
A | LYS153 |
A | TYR165 |
A | PHE167 |
A | GLU170 |
A | HOH1019 |
A | HOH1140 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue EDO A 206 |
Chain | Residue |
A | GLY92 |
A | THR93 |
A | ARG156 |
A | GLU164 |
A | HOH1034 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue EDO A 207 |
Chain | Residue |
A | LYS69 |
D | TYR36 |
D | GLU39 |
D | LYS53 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue EDO A 208 |
Chain | Residue |
A | LYS50 |
A | PHE51 |
A | GLU54 |
A | LEU171 |
site_id | AC9 |
Number of Residues | 4 |
Details | binding site for residue EDO A 209 |
Chain | Residue |
A | GLN99 |
A | ASP104 |
A | HOH1009 |
D | HOH328 |
site_id | AD1 |
Number of Residues | 9 |
Details | binding site for residue SO4 A 210 |
Chain | Residue |
A | SER87 |
A | MET88 |
A | ARG89 |
A | HOH1045 |
A | HOH1046 |
A | HOH1127 |
C | SER87 |
C | MET88 |
C | ARG89 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 211 |
Chain | Residue |
A | SER28 |
A | TYR29 |
A | SER56 |
A | ARG61 |
D | SO4207 |
site_id | AD3 |
Number of Residues | 5 |
Details | binding site for residue SO4 A 212 |
Chain | Residue |
A | GLN7 |
A | ASN8 |
A | HOH1082 |
E | HOH305 |
E | HOH374 |
site_id | AD4 |
Number of Residues | 9 |
Details | binding site for residue EDO B 201 |
Chain | Residue |
B | TYR31 |
B | PHE51 |
B | SER55 |
B | GLU59 |
B | GLU60 |
B | GLU106 |
B | SER143 |
B | HOH308 |
B | HOH337 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue EDO B 202 |
Chain | Residue |
B | LYS153 |
B | PHE167 |
B | GLU170 |
C | TYR165 |
site_id | AD6 |
Number of Residues | 6 |
Details | binding site for residue EDO B 203 |
Chain | Residue |
B | TYR165 |
D | LYS153 |
D | PHE167 |
D | GLU170 |
D | LEU171 |
D | HOH357 |
site_id | AD7 |
Number of Residues | 7 |
Details | binding site for residue EDO B 204 |
Chain | Residue |
B | PHE51 |
B | GLU54 |
B | SER55 |
B | GLU59 |
B | LYS146 |
B | HOH308 |
B | HOH388 |
site_id | AD8 |
Number of Residues | 5 |
Details | binding site for residue EDO B 205 |
Chain | Residue |
B | GLU164 |
D | ARG156 |
B | TYR37 |
B | LEU45 |
B | GLY92 |
site_id | AD9 |
Number of Residues | 6 |
Details | binding site for residue EDO B 206 |
Chain | Residue |
B | ASN18 |
B | LYS19 |
B | VAL79 |
B | GLN81 |
B | GLN81 |
B | HOH349 |
site_id | AE1 |
Number of Residues | 5 |
Details | binding site for residue EDO B 207 |
Chain | Residue |
B | LYS50 |
B | PHE51 |
B | GLU54 |
B | LEU171 |
B | ASN172 |
site_id | AE2 |
Number of Residues | 5 |
Details | binding site for residue SO4 B 208 |
Chain | Residue |
B | GLN7 |
B | ASN8 |
B | HOH328 |
B | HOH395 |
C | HOH311 |
site_id | AE3 |
Number of Residues | 4 |
Details | binding site for residue SO4 B 209 |
Chain | Residue |
B | MET88 |
B | ARG89 |
B | GLU90 |
B | HOH424 |
site_id | AE4 |
Number of Residues | 6 |
Details | binding site for residue SO4 B 210 |
Chain | Residue |
B | SER28 |
B | TYR29 |
B | SER56 |
E | LEU25 |
E | ARG61 |
E | SO4213 |
site_id | AE5 |
Number of Residues | 5 |
Details | binding site for residue CL B 211 |
Chain | Residue |
B | ALA84 |
B | ALA85 |
E | GLN82 |
E | MET88 |
E | ARG89 |
site_id | AE6 |
Number of Residues | 7 |
Details | binding site for residue EDO C 201 |
Chain | Residue |
C | TYR31 |
C | PHE51 |
C | SER55 |
C | GLU60 |
C | GLU106 |
C | SER143 |
C | HOH326 |
site_id | AE7 |
Number of Residues | 6 |
Details | binding site for residue EDO C 202 |
Chain | Residue |
C | PHE51 |
C | GLU54 |
C | SER55 |
C | GLU59 |
C | LYS146 |
C | HOH308 |
site_id | AE8 |
Number of Residues | 6 |
Details | binding site for residue EDO C 203 |
Chain | Residue |
B | HOH455 |
C | LYS145 |
C | ASP149 |
C | HOH339 |
C | HOH434 |
E | GLU39 |
site_id | AE9 |
Number of Residues | 6 |
Details | binding site for residue EDO C 204 |
Chain | Residue |
C | ALA157 |
C | GLY158 |
C | THR160 |
C | LEU162 |
C | GLY163 |
C | EDO207 |
site_id | AF1 |
Number of Residues | 4 |
Details | binding site for residue EDO C 206 |
Chain | Residue |
B | ARG156 |
C | LEU45 |
C | GLY92 |
C | GLU164 |
site_id | AF2 |
Number of Residues | 7 |
Details | binding site for residue EDO C 207 |
Chain | Residue |
C | ARG156 |
C | ALA157 |
C | EDO204 |
C | HOH316 |
E | GLY161 |
E | LEU162 |
E | HOH416 |
site_id | AF3 |
Number of Residues | 6 |
Details | binding site for residue EDO C 208 |
Chain | Residue |
C | LYS153 |
C | PHE167 |
C | GLU170 |
C | HOH436 |
E | TYR165 |
E | EDO211 |
site_id | AF4 |
Number of Residues | 4 |
Details | binding site for residue EDO C 209 |
Chain | Residue |
C | TYR9 |
C | HIS10 |
C | ASN123 |
C | HOH321 |
site_id | AF5 |
Number of Residues | 5 |
Details | binding site for residue EDO C 210 |
Chain | Residue |
C | HOH314 |
F | GLN99 |
F | ASP104 |
F | HOH305 |
F | HOH391 |
site_id | AF6 |
Number of Residues | 6 |
Details | binding site for residue SO4 C 211 |
Chain | Residue |
C | SER28 |
C | TYR29 |
C | SER56 |
C | ARG61 |
F | ARG61 |
F | SO4208 |
site_id | AF7 |
Number of Residues | 3 |
Details | binding site for residue MG C 212 |
Chain | Residue |
C | GLY158 |
C | PRO159 |
C | THR160 |
site_id | AF8 |
Number of Residues | 1 |
Details | binding site for residue MG C 213 |
Chain | Residue |
C | ASN8 |
site_id | AF9 |
Number of Residues | 9 |
Details | binding site for residue EDO D 201 |
Chain | Residue |
C | GLN82 |
D | ASN22 |
D | MET23 |
D | TYR26 |
D | GLN82 |
D | ALA84 |
D | HOH329 |
D | HOH347 |
F | GLN82 |
site_id | AG1 |
Number of Residues | 8 |
Details | binding site for residue EDO D 202 |
Chain | Residue |
D | TYR31 |
D | PHE51 |
D | SER55 |
D | GLU60 |
D | GLU106 |
D | SER143 |
D | HOH304 |
D | HOH343 |
site_id | AG2 |
Number of Residues | 6 |
Details | binding site for residue EDO D 203 |
Chain | Residue |
B | GLU39 |
D | LYS145 |
D | ASP149 |
D | HOH399 |
D | HOH409 |
D | HOH436 |
site_id | AG3 |
Number of Residues | 7 |
Details | binding site for residue EDO D 204 |
Chain | Residue |
D | PHE51 |
D | GLU54 |
D | SER55 |
D | GLU59 |
D | LYS146 |
D | HOH304 |
D | HOH317 |
site_id | AG4 |
Number of Residues | 4 |
Details | binding site for residue EDO D 205 |
Chain | Residue |
D | LEU45 |
D | GLY92 |
D | GLU164 |
E | ARG156 |
site_id | AG5 |
Number of Residues | 3 |
Details | binding site for residue SO4 D 206 |
Chain | Residue |
D | MET88 |
D | ARG89 |
D | GLU90 |
site_id | AG6 |
Number of Residues | 5 |
Details | binding site for residue SO4 D 207 |
Chain | Residue |
A | ARG61 |
A | SO4211 |
D | SER28 |
D | TYR29 |
D | ARG61 |
site_id | AG7 |
Number of Residues | 4 |
Details | binding site for residue MG D 208 |
Chain | Residue |
D | SER3 |
D | ARG6 |
D | GLY75 |
D | HOH440 |
site_id | AG8 |
Number of Residues | 1 |
Details | binding site for residue MG D 209 |
Chain | Residue |
D | ASN8 |
site_id | AG9 |
Number of Residues | 8 |
Details | binding site for residue EDO E 201 |
Chain | Residue |
E | TYR31 |
E | PHE51 |
E | SER55 |
E | GLU60 |
E | GLU106 |
E | SER143 |
E | HOH318 |
E | HOH327 |
site_id | AH1 |
Number of Residues | 6 |
Details | binding site for residue EDO E 202 |
Chain | Residue |
A | HOH1167 |
D | GLU39 |
E | LYS145 |
E | ASP149 |
E | HOH388 |
E | HOH426 |
site_id | AH2 |
Number of Residues | 6 |
Details | binding site for residue EDO E 203 |
Chain | Residue |
E | PHE51 |
E | GLU54 |
E | SER55 |
E | GLU59 |
E | LYS146 |
E | HOH327 |
site_id | AH3 |
Number of Residues | 5 |
Details | binding site for residue EDO E 204 |
Chain | Residue |
A | ASN124 |
E | LEU114 |
E | HIS117 |
E | SER118 |
E | SER121 |
site_id | AH4 |
Number of Residues | 4 |
Details | binding site for residue EDO E 205 |
Chain | Residue |
E | MET23 |
E | TYR26 |
E | HOH309 |
E | HOH331 |
site_id | AH5 |
Number of Residues | 5 |
Details | binding site for residue EDO E 206 |
Chain | Residue |
C | ARG156 |
E | LEU45 |
E | GLY92 |
E | THR93 |
E | GLU164 |
site_id | AH6 |
Number of Residues | 4 |
Details | binding site for residue EDO E 207 |
Chain | Residue |
D | TYR165 |
E | LYS153 |
E | PHE167 |
E | GLU170 |
site_id | AH7 |
Number of Residues | 6 |
Details | binding site for residue EDO E 208 |
Chain | Residue |
B | ARG40 |
E | ALA2 |
E | SER3 |
E | ARG77 |
E | HOH322 |
E | HOH393 |
site_id | AH8 |
Number of Residues | 3 |
Details | binding site for residue EDO E 209 |
Chain | Residue |
E | ASP12 |
E | ALA15 |
E | EDO210 |
site_id | AH9 |
Number of Residues | 3 |
Details | binding site for residue EDO E 210 |
Chain | Residue |
E | ASP12 |
E | SER16 |
E | EDO209 |
site_id | AI1 |
Number of Residues | 4 |
Details | binding site for residue EDO E 212 |
Chain | Residue |
E | TYR26 |
E | SER87 |
E | TRP91 |
E | HOH392 |
site_id | AI2 |
Number of Residues | 8 |
Details | binding site for residue SO4 E 213 |
Chain | Residue |
B | LEU25 |
B | ARG61 |
B | SO4210 |
E | LEU25 |
E | SER28 |
E | TYR29 |
E | SER56 |
E | ARG61 |
site_id | AI3 |
Number of Residues | 5 |
Details | binding site for residue SO4 E 214 |
Chain | Residue |
D | HOH314 |
E | GLN7 |
E | ASN8 |
E | HOH412 |
E | HOH422 |
site_id | AI4 |
Number of Residues | 8 |
Details | binding site for residue EDO F 201 |
Chain | Residue |
F | TYR31 |
F | PHE51 |
F | SER55 |
F | GLU60 |
F | GLU106 |
F | SER143 |
F | HOH307 |
F | HOH330 |
site_id | AI5 |
Number of Residues | 7 |
Details | binding site for residue EDO F 203 |
Chain | Residue |
F | PHE51 |
F | GLU54 |
F | SER55 |
F | GLU59 |
F | LYS146 |
F | HOH307 |
F | HOH308 |
site_id | AI6 |
Number of Residues | 5 |
Details | binding site for residue EDO F 204 |
Chain | Residue |
C | ASN124 |
C | PRO126 |
F | LEU114 |
F | HIS117 |
F | SER118 |
site_id | AI7 |
Number of Residues | 5 |
Details | binding site for residue EDO F 205 |
Chain | Residue |
F | LYS153 |
F | TYR165 |
F | PHE167 |
F | GLU170 |
F | HOH332 |
site_id | AI8 |
Number of Residues | 7 |
Details | binding site for residue EDO F 206 |
Chain | Residue |
A | SER87 |
F | ALA15 |
F | ASN18 |
F | GLN81 |
F | HOH304 |
F | HOH311 |
F | HOH386 |
site_id | AI9 |
Number of Residues | 5 |
Details | binding site for residue EDO F 207 |
Chain | Residue |
F | TYR37 |
F | LEU45 |
F | GLY92 |
F | ARG156 |
F | GLU164 |
site_id | AJ1 |
Number of Residues | 5 |
Details | binding site for residue SO4 F 208 |
Chain | Residue |
C | ARG61 |
C | SO4211 |
F | SER28 |
F | TYR29 |
F | SER56 |
site_id | AJ2 |
Number of Residues | 3 |
Details | binding site for residue SO4 F 209 |
Chain | Residue |
F | MET88 |
F | ARG89 |
F | GLU90 |
site_id | AJ3 |
Number of Residues | 2 |
Details | binding site for residue MG F 210 |
Chain | Residue |
F | ASN8 |
F | HOH460 |
site_id | AJ4 |
Number of Residues | 17 |
Details | binding site for Di-peptide EDO C 205 and GLU C 39 |
Chain | Residue |
B | LYS145 |
B | ASP149 |
C | ALA35 |
C | TYR36 |
C | TYR37 |
C | PHE38 |
C | ARG40 |
C | ASP41 |
C | ALA49 |
C | LYS53 |
C | HOH301 |
C | HOH312 |
C | HOH318 |
C | HOH344 |
C | HOH359 |
C | HOH435 |
F | ASN72 |
site_id | AJ5 |
Number of Residues | 13 |
Details | binding site for Di-peptide EDO E 211 and LYS E 169 |
Chain | Residue |
C | LYS153 |
C | GLU170 |
C | EDO208 |
C | HOH437 |
E | TYR165 |
E | MET166 |
E | PHE167 |
E | ASP168 |
E | GLU170 |
E | LEU171 |
E | ASN172 |
E | HOH302 |
E | HOH411 |
site_id | AJ6 |
Number of Residues | 18 |
Details | binding site for Di-peptide EDO F 202 and GLU F 39 |
Chain | Residue |
C | LYS69 |
C | ASN72 |
F | ALA35 |
F | TYR36 |
F | TYR37 |
F | PHE38 |
F | ARG40 |
F | ASP41 |
F | LYS53 |
F | LYS145 |
F | LYS145 |
F | ASP149 |
F | HOH301 |
F | HOH309 |
F | HOH337 |
F | HOH434 |
F | HOH447 |
F | HOH457 |