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6A47

Structure of TREX2 in complex with a Y structured dsDNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003676molecular_functionnucleic acid binding
A0004527molecular_functionexonuclease activity
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006259biological_processDNA metabolic process
A0006281biological_processDNA repair
A0006308biological_processDNA catabolic process
A0008296molecular_function3'-5'-DNA exonuclease activity
A0008311molecular_functiondouble-stranded DNA 3'-5' DNA exonuclease activity
A0008408molecular_function3'-5' exonuclease activity
A0042803molecular_functionprotein homodimerization activity
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0003676molecular_functionnucleic acid binding
B0004527molecular_functionexonuclease activity
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0006259biological_processDNA metabolic process
B0006281biological_processDNA repair
B0006308biological_processDNA catabolic process
B0008296molecular_function3'-5'-DNA exonuclease activity
B0008311molecular_functiondouble-stranded DNA 3'-5' DNA exonuclease activity
B0008408molecular_function3'-5' exonuclease activity
B0042803molecular_functionprotein homodimerization activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue MG A 301
ChainResidue
AASP14
AGLU16
AASP193
CDT23

site_idAC2
Number of Residues4
Detailsbinding site for residue NA A 302
ChainResidue
AGLU29
ASER189
AALA190
AGLU191

site_idAC3
Number of Residues4
Detailsbinding site for residue MG B 301
ChainResidue
BGLU16
BASP193
DDT23
BASP14

site_idAC4
Number of Residues6
Detailsbinding site for residue MG C 101
ChainResidue
AASP14
AHOH414
AHOH437
AHOH502
CDT22
CDT23

site_idAC5
Number of Residues6
Detailsbinding site for residue MG D 101
ChainResidue
BASP14
BHOH416
BHOH448
BHOH526
DDT22
DDT23

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000250
ChainResidueDetails
AHIS188
BHIS188

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP14
AGLU16
ATYR122
AASP193
BASP14
BGLU16
BTYR122
BASP193

222415

PDB entries from 2024-07-10

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