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5ZXM

Crystal Structure of GyraseB N-terminal at 1.93A Resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A0005524molecular_functionATP binding
A0006265biological_processDNA topological change
B0003677molecular_functionDNA binding
B0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
B0005524molecular_functionATP binding
B0006265biological_processDNA topological change
Functional Information from PDB Data
site_idAC1
Number of Residues27
Detailsbinding site for residue ADP A 501
ChainResidue
AASN46
ATYR109
AGLY114
ALEU115
AHIS116
AGLY117
AVAL118
AGLY119
AVAL120
ATHR165
AMG505
AGLU50
AHOH606
AHOH627
AHOH653
AHOH658
AHOH672
AHOH673
BTYR5
BILE10
AASP73
AILE78
AILE94
AALA100
AGLY101
AGLY102
ALYS103

site_idAC2
Number of Residues7
Detailsbinding site for residue SO4 A 502
ChainResidue
APRO79
ATHR80
AGLY81
AARG136
AHOH641
BASP6
BSER7

site_idAC3
Number of Residues5
Detailsbinding site for residue PEG A 503
ChainResidue
ALEU13
AASP17
AARG20
ALYS21
AHOH697

site_idAC4
Number of Residues4
Detailsbinding site for residue PEG A 504
ChainResidue
AARG20
AHIS147
AVAL149
AHOH830

site_idAC5
Number of Residues3
Detailsbinding site for residue MG A 505
ChainResidue
AASN46
AADP501
AHOH605

site_idAC6
Number of Residues25
Detailsbinding site for residue ADP B 501
ChainResidue
ATYR5
AILE10
BASN46
BGLU50
BASP73
BILE78
BILE94
BALA100
BGLY101
BGLY102
BLYS103
BTYR109
BGLY114
BLEU115
BHIS116
BGLY117
BVAL118
BGLY119
BVAL120
BTHR165
BHOH633
BHOH651
BHOH674
BHOH725
BHOH735

site_idAC7
Number of Residues7
Detailsbinding site for residue SO4 B 502
ChainResidue
AASP6
ASER7
BPRO79
BTHR80
BGLY81
BARG136
BHOH604

site_idAC8
Number of Residues3
Detailsbinding site for residue PEG B 503
ChainResidue
BPRO235
BILE236
BHIS237

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL B 504
ChainResidue
BASP17
BARG20
BLYS21
BHOH610
BHOH621

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL B 505
ChainResidue
BTHR290
BGLY312
BASP313
BARG316
BHOH654
BHOH721

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PDB entries from 2024-07-24

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