Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZK9

Stapled-peptides tailored against initiation of translation

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003743molecular_functiontranslation initiation factor activity
A0005737cellular_componentcytoplasm
A0006413biological_processtranslational initiation
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue MGP A 1001
ChainResidue
ALYS54
AHOH1104
AHOH1118
AHOH1126
AHOH1131
AHOH1136
AHOH1154
AHOH1197
ATHR55
ATRP56
AMET101
ATRP102
AGLU103
AARG157
ALYS162
AHOH1102

site_idAC2
Number of Residues5
Detailsbinding site for residue PEG A 1002
ChainResidue
ATHR116
AGLN121
AVAL194
AILE195
AHOH1117

site_idAC3
Number of Residues9
Detailsbinding site for residue PEG A 1003
ChainResidue
AGLN40
AASN41
AASN118
AGLN121
ASER124
AASP147
AHOH1151
AHOH1164
BARG2

site_idAC4
Number of Residues8
Detailsbinding site for residue GOL A 1004
ChainResidue
AARG42
AASP96
ALYS119
AGLN120
AARG122
AARG123
AHOH1113
AHOH1123

site_idAC5
Number of Residues8
Detailsbinding site for residues MK8 B 8 and MK8 B 12
ChainResidue
BSER6
BARG7
BGLN9
BLEU10
BLEU11
BLEU13
BLYS14
BNH215

Functional Information from PROSITE/UniProt
site_idPS00813
Number of Residues24
DetailsIF4E Eukaryotic initiation factor 4E signature. DYslFKdgIePmWEDeknkrGGRW
ChainResidueDetails
AASP90-TRP113

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsRegion: {"description":"EIF4EBP1/2/3 binding","evidences":[{"source":"PubMed","id":"16271312","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11879179","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12975586","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16271312","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsSite: {"description":"(Microbial infection) Interaction with potato virus Y VPg","evidences":[{"source":"PubMed","id":"31712417","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon