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5ZE6

CRYSTAL STRUCTURE OF OCTAPRENYL PYROPHOSPHATE SYNTHASE FROM ESCHERICHIA COLI WITH BPH-981

Functional Information from GO Data
ChainGOidnamespacecontents
A0004659molecular_functionprenyltransferase activity
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006744biological_processubiquinone biosynthetic process
A0008299biological_processisoprenoid biosynthetic process
A0016094biological_processpolyprenol biosynthetic process
A0016740molecular_functiontransferase activity
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0046872molecular_functionmetal ion binding
A0106350molecular_functionall-trans-octaprenyl-diphosphate synthase activity
B0004659molecular_functionprenyltransferase activity
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0006744biological_processubiquinone biosynthetic process
B0008299biological_processisoprenoid biosynthetic process
B0016094biological_processpolyprenol biosynthetic process
B0016740molecular_functiontransferase activity
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0046872molecular_functionmetal ion binding
B0106350molecular_functionall-trans-octaprenyl-diphosphate synthase activity
C0004659molecular_functionprenyltransferase activity
C0005515molecular_functionprotein binding
C0005829cellular_componentcytosol
C0006744biological_processubiquinone biosynthetic process
C0008299biological_processisoprenoid biosynthetic process
C0016094biological_processpolyprenol biosynthetic process
C0016740molecular_functiontransferase activity
C0042802molecular_functionidentical protein binding
C0042803molecular_functionprotein homodimerization activity
C0046872molecular_functionmetal ion binding
C0106350molecular_functionall-trans-octaprenyl-diphosphate synthase activity
D0004659molecular_functionprenyltransferase activity
D0005515molecular_functionprotein binding
D0005829cellular_componentcytosol
D0006744biological_processubiquinone biosynthetic process
D0008299biological_processisoprenoid biosynthetic process
D0016094biological_processpolyprenol biosynthetic process
D0016740molecular_functiontransferase activity
D0042802molecular_functionidentical protein binding
D0042803molecular_functionprotein homodimerization activity
D0046872molecular_functionmetal ion binding
D0106350molecular_functionall-trans-octaprenyl-diphosphate synthase activity
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue HJX A 401
ChainResidue
AHIS77
CTYR116
ATHR80
ALEU81
AASP84
AARG93
AASP113
AGLU146
AHOH529
CASP113

site_idAC2
Number of Residues8
Detailsbinding site for residue HJX B 401
ChainResidue
BTHR80
BLEU81
BASP84
BASP113
BGLU146
BHOH502
DASP113
DTYR116

site_idAC3
Number of Residues5
Detailsbinding site for residue MG B 402
ChainResidue
BASP84
BASP88
BGLU146
BHOH502
BHOH504

site_idAC4
Number of Residues3
Detailsbinding site for residue MG B 403
ChainResidue
BASP84
BASP88
BHOH502

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. LGtaFQLiDDLlD
ChainResidueDetails
ALEU203-ASP215

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LLhDDvv..DesdmRRG
ChainResidueDetails
ALEU81-GLY95

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues18
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P14324","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q12051","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues15
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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