Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004519 | molecular_function | endonuclease activity |
A | 0033151 | biological_process | V(D)J recombination |
A | 0043565 | molecular_function | sequence-specific DNA binding |
A | 0061630 | molecular_function | ubiquitin protein ligase activity |
B | 0003677 | molecular_function | DNA binding |
B | 0005634 | cellular_component | nucleus |
B | 0006310 | biological_process | DNA recombination |
C | 0004519 | molecular_function | endonuclease activity |
C | 0033151 | biological_process | V(D)J recombination |
C | 0043565 | molecular_function | sequence-specific DNA binding |
C | 0061630 | molecular_function | ubiquitin protein ligase activity |
D | 0003677 | molecular_function | DNA binding |
D | 0005634 | cellular_component | nucleus |
D | 0006310 | biological_process | DNA recombination |
N | 0003677 | molecular_function | DNA binding |
N | 0005634 | cellular_component | nucleus |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | binding site for residue CA A 2001 |
Chain | Residue |
A | ASP600 |
A | GLY601 |
A | ASP708 |
A | GLU962 |
A | HOH2103 |
F | DG30 |
F | DT31 |
F | HOH102 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue ZN A 2002 |
Chain | Residue |
A | CYS730 |
A | HIS937 |
A | HIS942 |
A | CYS727 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue EDO A 2003 |
Chain | Residue |
A | VAL545 |
A | ASP546 |
A | GLU547 |
B | TYR277 |
B | TRP317 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue EDO A 2004 |
Chain | Residue |
A | GLU716 |
A | THR728 |
A | ARG748 |
A | ASN753 |
A | THR787 |
A | PRO789 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue K A 2005 |
Chain | Residue |
A | GLU649 |
A | SER963 |
A | HOH2102 |
A | HOH2123 |
L | DA18 |
L | DC19 |
site_id | AC6 |
Number of Residues | 7 |
Details | binding site for residue CA C 2001 |
Chain | Residue |
C | ASP600 |
C | GLY601 |
C | GLU962 |
C | HOH2103 |
C | HOH2108 |
C | HOH2111 |
G | DT42 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue ZN C 2002 |
Chain | Residue |
C | CYS727 |
C | CYS730 |
C | HIS937 |
C | HIS942 |
site_id | AC8 |
Number of Residues | 5 |
Details | binding site for residue K C 2003 |
Chain | Residue |
C | GLU649 |
C | SER963 |
G | HOH102 |
M | DA18 |
M | DC19 |
site_id | AC9 |
Number of Residues | 3 |
Details | binding site for residue EDO C 2004 |
Chain | Residue |
C | ARG628 |
C | ARG703 |
C | TRP956 |
Functional Information from PROSITE/UniProt
site_id | PS00353 |
Number of Residues | 12 |
Details | HMG_BOX_1 HMG box A DNA-binding domain signature. FSKKCsERWKTM |
Chain | Residue | Details |
N | PHE41-MET52 | |
site_id | PS00435 |
Number of Residues | 11 |
Details | PEROXIDASE_1 Peroxidases proximal heme-ligand signature. DTVYILGGHSL |
Chain | Residue | Details |
B | ASP214-LEU224 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
N | PRO9-ILE79 | |
C | GLY389-GLN456 | |
Chain | Residue | Details |
N | PRO95-ARG163 | |
A | ASP708 | |
A | GLU962 | |
C | ASP600 | |
C | ASP708 | |
C | GLU962 | |
Chain | Residue | Details |
N | MET1 | |
C | TRP893 | |
Chain | Residue | Details |
N | ARG10 | |
Chain | Residue | Details |
N | ASP67 | |
Chain | Residue | Details |
N | LYS3 | |
N | LYS7 | |
N | LYS8 | |
N | LYS12 | |
N | LYS28 | |
N | LYS29 | |
N | LYS127 | |
N | LYS128 | |
Chain | Residue | Details |
N | CYS23 | |
N | CYS45 | |
Chain | Residue | Details |
N | LYS30 | |
N | LYS43 | |
N | LYS90 | |
N | LYS141 | |
Chain | Residue | Details |
N | SER35 | |
N | SER100 | |
Chain | Residue | Details |
N | CYS106 | |
site_id | SWS_FT_FI11 |
Number of Residues | 5 |
Details | CROSSLNK: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-?) => ECO:0000250|UniProtKB:P09429 |
Chain | Residue | Details |
N | LYS28 | |
N | LYS43 | |
N | LYS44 | |
N | LYS68 | |