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5ZDM

The ligand-free structure of FomD

Functional Information from GO Data
ChainGOidnamespacecontents
A0016787molecular_functionhydrolase activity
A0017000biological_processantibiotic biosynthetic process
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue CA A 301
ChainResidue
AASN109
AASP125
AASP129
AHOH442
AHOH459

site_idAC2
Number of Residues4
Detailsbinding site for residue CA A 302
ChainResidue
AGLU127
AASP129
AASP143
AHOH442

site_idAC3
Number of Residues9
Detailsbinding site for residue GOL A 303
ChainResidue
AARG20
AASP22
AILE30
ATYR32
AHIS66
ATRP68
ATRP93
AASP125
AHOH410

site_idAC4
Number of Residues6
Detailsbinding site for residue GOL A 304
ChainResidue
ASER136
AARG137
APHE139
AILE175
AHOH414
AHOH458

site_idAC5
Number of Residues4
Detailsbinding site for residue GOL A 305
ChainResidue
AGLU105
AARG140
AHOH413
AHOH416

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"30010320","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30010320","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5ZDN","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30010320","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5ZDM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5ZDN","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

243531

PDB entries from 2025-10-22

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