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5Z9N

S.aureus GyrB ATPase domain in complex with 4,6-dichloro-2-(methylthio)pyrimidine

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A0005524molecular_functionATP binding
A0006265biological_processDNA topological change
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue HX5 A 301
ChainResidue
AASN46
AGLU50
AVAL71
AASP73
AVAL120
ATHR165
AHOH405

site_idAC2
Number of Residues3
Detailsbinding site for residue SO4 A 302
ChainResidue
ASO4303
AALA152
AARG192

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 303
ChainResidue
AVAL88
AGLU92
APRO150
AGLU193
ASO4302

site_idAC4
Number of Residues1
Detailsbinding site for residue SO4 A 304
ChainResidue
AARG192

site_idAC5
Number of Residues2
Detailsbinding site for residue SO4 A 305
ChainResidue
AASP31
AASN178

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton acceptor (ATPase activity)","evidences":[{"source":"PubMed","id":"10734094","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"8248233","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"10734094","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25202966","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25849408","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"25849408","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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