Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Z9N

S.aureus GyrB ATPase domain in complex with 4,6-dichloro-2-(methylthio)pyrimidine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2017-01-23
DetectorADSC QUANTUM 315r
Wavelength(s)0.979
Spacegroup nameP 42 21 2
Unit cell lengths97.684, 97.684, 54.406
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution69.170 - 2.540
R-factor0.20591
Rwork0.205
R-free0.23172
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4duh
RMSD bond length0.008
RMSD bond angle1.286
Data reduction softwareHKL-2000
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]97.6902.640
High resolution limit [Å]2.5402.550
Rmerge0.1230.467
Number of reflections9100876
<I/σ(I)>42.510.6
Completeness [%]99.999.8
Redundancy11.611.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.1M MES pH 6.0, 2.5M MgSO4, 8mM Tris-(2-carboxyethyl)phosphine (TECP)

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon