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5Z5E

Crystal structure of the Glycyl-tRNA synthetase (GlyRS) in Nanoarchaeum equitans

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004820molecular_functionglycine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006418biological_processtRNA aminoacylation for protein translation
B0000166molecular_functionnucleotide binding
B0004812molecular_functionaminoacyl-tRNA ligase activity
B0004820molecular_functionglycine-tRNA ligase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006418biological_processtRNA aminoacylation for protein translation
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue SO4 A 601
ChainResidue
AARG223
AARG228
ALYS332
AARG378
AHOH707
AHOH709

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 602
ChainResidue
AHOH804
AARG217
AGLN234
AHOH794

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 603
ChainResidue
AARG223
AGLN224
AHOH736
AHOH761

site_idAC4
Number of Residues3
Detailsbinding site for residue GOL A 604
ChainResidue
AILE22
AALA23
AARG230

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 B 601
ChainResidue
BLYS4
BARG223
BGLN224

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 B 602
ChainResidue
BARG223
BARG228
BLYS332
BARG378
BHOH704

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 B 603
ChainResidue
BSER161
BGLU162
BARG269

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 B 604
ChainResidue
BARG217
BHOH738
BHOH746
BHOH751

site_idAC9
Number of Residues2
Detailsbinding site for residue SO4 B 605
ChainResidue
AARG202
BARG463

site_idAD1
Number of Residues2
Detailsbinding site for residue GOL B 606
ChainResidue
BALA23
BARG230

site_idAD2
Number of Residues6
Detailsbinding site for residue GOL B 607
ChainResidue
BGLU396
BASP398
BASN399
BSER456
BILE457
BGLY458

site_idAD3
Number of Residues1
Detailsbinding site for residue GOL B 608
ChainResidue
BLEU388

219869

PDB entries from 2024-05-15

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