Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YWS

Crystal structure of TREX1 in complex with a Y structured DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0008408molecular_function3'-5' exonuclease activity
B0003676molecular_functionnucleic acid binding
B0008408molecular_function3'-5' exonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 301
ChainResidue
AASP18
AGLU20
AASP200
AMG302
CDC22

site_idAC2
Number of Residues7
Detailsbinding site for residue MG A 302
ChainResidue
AHOH526
CDT21
CDC22
AASP18
AMG301
AHOH417
AHOH465

site_idAC3
Number of Residues5
Detailsbinding site for residue MG B 301
ChainResidue
BASP18
BGLU20
BASP200
BMG302
DDC22

site_idAC4
Number of Residues7
Detailsbinding site for residue MG B 302
ChainResidue
BASP18
BMG301
BHOH424
BHOH447
BHOH542
DDT21
DDC22

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000269|PubMed:17355961
ChainResidueDetails
AHIS195
BHIS195

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:17293595, ECO:0000269|PubMed:17355961, ECO:0000269|PubMed:18780819, ECO:0000269|PubMed:22071149
ChainResidueDetails
AASP18
AGLU20
ATYR129
AASP200
BASP18
BGLU20
BTYR129
BASP200

site_idSWS_FT_FI3
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q9NSU2
ChainResidueDetails
ASER78
ASER167
BSER78
BSER167

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon