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5YTY

Crystal structure of echinomycin-d(ACGACGT/ACGTCGT) complex

Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue MG A 101
ChainResidue
ADG6
AHOH209

site_idAC2
Number of Residues6
Detailsbinding site for residue MN B 101
ChainResidue
ADG3
AHOH212
AHOH217
AHOH219
BDG3
BHOH211

site_idAC3
Number of Residues3
Detailsbinding site for residue MG B 102
ChainResidue
BHOH207
BHOH215
BDG6

site_idAC4
Number of Residues8
Detailsbinding site for residue QUI D 101
ChainResidue
ADA1
ADC2
BDG6
BDT7
DDSN1
DALA2
DMVA8
DHOH203

site_idAC5
Number of Residues8
Detailsbinding site for residue QUI D 102
ChainResidue
ADG3
ADA4
BDT4
BDC5
DMVA4
DDSN5
DALA6
DHOH202

site_idAC6
Number of Residues6
Detailsbinding site for residues N2C D 3 and NCY D 7
ChainResidue
DDSN1
DALA2
DMVA4
DDSN5
DALA6
DMVA8

site_idAC7
Number of Residues11
Detailsbinding site for residues N2C D 3 and MVA D 4
ChainResidue
ADG3
BDT4
BDC5
DDSN1
DALA2
DDSN5
DALA6
DNCY7
DQUI102
FMVA8
FHOH203

site_idAC8
Number of Residues8
Detailsbinding site for residues NCY D 7 and MVA D 8
ChainResidue
ADA1
ADC2
BDG6
DDSN1
DALA2
DN2C3
DALA6
DQUI101

site_idAC9
Number of Residues11
Detailsbinding site for Di-peptide DSN F 1 and MVA F 8
ChainResidue
ADA4
ADC5
BDG3
BDT4
DMVA4
FALA2
FALA6
FNCY7
FQUI101
FHOH201
FHOH203

site_idAD1
Number of Residues8
Detailsbinding site for Di-peptide DSN F 1 and ALA F 2
ChainResidue
BDG3
BDT4
FN2C3
FMVA4
FALA6
FNCY7
FMVA8
FQUI101

site_idAD2
Number of Residues8
Detailsbinding site for Di-peptide ALA F 2 and N2C F 3
ChainResidue
BDG3
FDSN1
FMVA4
FDSN5
FALA6
FNCY7
FMVA8
FQUI101

site_idAD3
Number of Residues6
Detailsbinding site for residues N2C F 3 and NCY F 7
ChainResidue
FDSN1
FALA2
FMVA4
FDSN5
FALA6
FMVA8

site_idAD4
Number of Residues7
Detailsbinding site for residues N2C F 3 and MVA F 4
ChainResidue
ADG6
BDC2
FALA2
FDSN5
FALA6
FNCY7
FQUI102

site_idAD5
Number of Residues7
Detailsbinding site for Di-peptide MVA F 4 and DSN F 5
ChainResidue
ADG6
ADT7
BDC2
FALA2
FN2C3
FALA6
FQUI102

site_idAD6
Number of Residues8
Detailsbinding site for Di-peptide DSN F 5 and ALA F 6
ChainResidue
ADG6
ADT7
FALA2
FN2C3
FMVA4
FNCY7
FMVA8
FQUI102

site_idAD7
Number of Residues8
Detailsbinding site for Di-peptide ALA F 6 and NCY F 7
ChainResidue
ADG6
FDSN1
FALA2
FN2C3
FMVA4
FDSN5
FMVA8
FQUI102

site_idAD8
Number of Residues10
Detailsbinding site for residues NCY F 7 and MVA F 8
ChainResidue
ADA4
ADC5
BDG3
DMVA4
FDSN1
FALA2
FN2C3
FALA6
FHOH201
FHOH203

site_idAD9
Number of Residues8
Detailsbinding site for Di-peptide QUI F 101 and DSN F 1
ChainResidue
ADA4
ADC5
BDG3
BDT4
FALA2
FNCY7
FMVA8
FHOH202

site_idAE1
Number of Residues8
Detailsbinding site for Di-peptide QUI F 102 and DSN F 5
ChainResidue
ADG6
ADT7
BDA1
BDC2
FN2C3
FMVA4
FALA6
FHOH204

222415

PDB entries from 2024-07-10

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