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5YTH

Structure of large fragment of DNA Polymerase I from Thermus aquaticus Host-Guest complex with the unnatural base M-fC pair with dG

Functional Information from GO Data
ChainGOidnamespacecontents
A0001882molecular_functionnucleoside binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues23
Detailsbinding site for residue DGT A 901
ChainResidue
AARG573
AARG660
ALYS663
APHE667
ATYR671
AASP785
AMG902
AMG903
AHOH1016
AHOH1020
AHOH1026
AASP610
BDOC112
BHOH201
CDC204
CDG205
ATYR611
ASER612
AGLN613
AILE614
AGLU615
AHIS639
AARG659

site_idAC2
Number of Residues4
Detailsbinding site for residue MG A 902
ChainResidue
AASP610
ATYR611
AASP785
ADGT901

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 903
ChainResidue
AASP610
AASP785
ADGT901
AHOH1022
BDOC112
BHOH201

site_idAC4
Number of Residues6
Detailsbinding site for residue GOL A 904
ChainResidue
ATHR544
APRO548
APRO579
AASN580
CDC209
CDC210

Functional Information from PROSITE/UniProt
site_idPS00447
Number of Residues20
DetailsDNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL
ChainResidueDetails
AARG659-LEU678

218853

PDB entries from 2024-04-24

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