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5YP2

Crystal structure of dipeptidyl peptidase IV (DPP IV) with DPP4 inhibitor from Pseudoxanthomonas mexicana WO24

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0008236molecular_functionserine-type peptidase activity
B0006508biological_processproteolysis
B0008236molecular_functionserine-type peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue 8YC A 801
ChainResidue
AARG106
AASN691
AVAL692
AHOH979
AGLU208
AGLU209
ATYR527
ASER613
AASN614
AVAL639
ATYR645
ATYR649

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 802
ChainResidue
AARG106
AILE107
AALA108
AALA109
AARG724
AHOH963

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL A 803
ChainResidue
ASER543
AASP544
ATRP612
AGLY722
ALEU723
AARG731

site_idAC4
Number of Residues6
Detailsbinding site for residue GOL B 802
ChainResidue
BARG106
BILE107
BALA108
BALA109
BHOH906
BHOH1006

site_idAC5
Number of Residues19
Detailsbinding site for Di-peptide 8YC B 801 and SER B 613
ChainResidue
BARG106
BGLU208
BGLU209
BTYR527
BALA531
BTRP612
BASN614
BGLY615
BGLY616
BTYR617
BGLY636
BALA637
BVAL639
BTYR645
BTYR649
BASN691
BVAL692
BHIS721
BHOH1012

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Charge relay system => ECO:0000250|UniProtKB:Q12884, ECO:0000255|PROSITE-ProRule:PRU10084
ChainResidueDetails
ASER613
BSER613

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: Charge relay system => ECO:0000250|UniProtKB:Q12884
ChainResidueDetails
AASP689
AHIS721
BASP689
BHIS721

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q12884
ChainResidueDetails
AGLU208
AGLU209
BGLU208
BGLU209

237992

PDB entries from 2025-06-25

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