Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YJ2

Crystal structure of Bacillus sp. TB-90 urate oxidase without dehydration

Functional Information from GO Data
ChainGOidnamespacecontents
A0004846molecular_functionurate oxidase activity
A0006144biological_processpurine nucleobase metabolic process
B0004846molecular_functionurate oxidase activity
B0006144biological_processpurine nucleobase metabolic process
C0004846molecular_functionurate oxidase activity
C0006144biological_processpurine nucleobase metabolic process
D0004846molecular_functionurate oxidase activity
D0006144biological_processpurine nucleobase metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue AZA A 401
ChainResidue
APHE184
BALA72
BTHR73
ALEU195
AARG201
ASER248
AILE249
AGLN250
AASN276
AOXY402
AHOH607

site_idAC2
Number of Residues6
Detailsbinding site for residue OXY A 402
ChainResidue
AASN276
AGLY302
AGLN304
AAZA401
AHOH502
BTHR73

site_idAC3
Number of Residues4
Detailsbinding site for residue MXE A 403
ChainResidue
AGLN275
APHE303
AOCS305
BLYS50

site_idAC4
Number of Residues12
Detailsbinding site for residue AZA B 401
ChainResidue
ATYR11
AALA72
ATHR73
AHOH716
BPHE184
BARG201
BSER248
BILE249
BGLN250
BASN276
BOXY402
BHOH639

site_idAC5
Number of Residues5
Detailsbinding site for residue OXY B 402
ChainResidue
ATHR73
BASN276
BGLY302
BGLN304
BAZA401

site_idAC6
Number of Residues2
Detailsbinding site for residue SO4 B 403
ChainResidue
BARG298
DARG298

site_idAC7
Number of Residues4
Detailsbinding site for residue MXE B 404
ChainResidue
ALYS50
BGLN275
BTYR301
BOCS305

site_idAC8
Number of Residues2
Detailsbinding site for residue SO4 C 401
ChainResidue
AARG298
CARG298

site_idAC9
Number of Residues12
Detailsbinding site for residue AZA C 402
ChainResidue
CPHE184
CLEU195
CARG201
CSER248
CILE249
CGLN250
CASN276
COXY403
CHOH640
DALA72
DTHR73
DHOH714

site_idAD1
Number of Residues5
Detailsbinding site for residue OXY C 403
ChainResidue
CASN276
CGLY302
CGLN304
CAZA402
DTHR73

site_idAD2
Number of Residues3
Detailsbinding site for residue MXE C 404
ChainResidue
CGLN275
CTYR301
COCS305

site_idAD3
Number of Residues12
Detailsbinding site for residue AZA D 401
ChainResidue
CALA72
CTHR73
DPHE184
DLEU195
DARG201
DSER248
DILE249
DGLN250
DASN276
DOXY402
DHOH631
DHOH652

site_idAD4
Number of Residues5
Detailsbinding site for residue OXY D 402
ChainResidue
CTHR73
DASN276
DGLY302
DGLN304
DAZA401

Functional Information from PROSITE/UniProt
site_idPS00366
Number of Residues28
DetailsURICASE Uricase signature. LqLIKVSgNsFvgFirdeYttLpedsnR
ChainResidueDetails
ALEU174-ARG201

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsACT_SITE: Charge relay system; for urate oxidase activity => ECO:0000250|UniProtKB:D0VWQ1
ChainResidueDetails
ALYS13
ATHR73
BLYS13
BTHR73
CLYS13
CTHR73
DLYS13
DTHR73

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: Charge relay system => ECO:0000250|UniProtKB:Q00511
ChainResidueDetails
ALYS24
BLYS24
CLYS24
DLYS24

site_idSWS_FT_FI3
Number of Residues20
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q00511
ChainResidueDetails
ATHR73
BASN276
CTHR73
CASP74
CILE249
CGLN250
CASN276
DTHR73
DASP74
DILE249
DGLN250
AASP74
DASN276
AILE249
AGLN250
AASN276
BTHR73
BASP74
BILE249
BGLN250

site_idSWS_FT_FI4
Number of Residues8
DetailsBINDING: BINDING => ECO:0000305|Ref.3
ChainResidueDetails
APHE184
AARG201
BPHE184
BARG201
CPHE184
CARG201
DPHE184
DARG201

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon