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5YIP

Crystal Structure of AnkG LIR/GABARAPL1 complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000045biological_processautophagosome assembly
A0000421cellular_componentautophagosome membrane
A0000423biological_processmitophagy
A0005515molecular_functionprotein binding
A0005543molecular_functionphospholipid binding
A0005739cellular_componentmitochondrion
A0005776cellular_componentautophagosome
A0005783cellular_componentendoplasmic reticulum
A0005794cellular_componentGolgi apparatus
A0005829cellular_componentcytosol
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0005886cellular_componentplasma membrane
A0005929cellular_componentcilium
A0006914biological_processautophagy
A0006995biological_processcellular response to nitrogen starvation
A0008092molecular_functioncytoskeletal protein binding
A0008429molecular_functionphosphatidylethanolamine binding
A0030659cellular_componentcytoplasmic vesicle membrane
A0030957molecular_functionTat protein binding
A0031410cellular_componentcytoplasmic vesicle
A0031625molecular_functionubiquitin protein ligase binding
A0032590cellular_componentdendrite membrane
A0032839cellular_componentdendrite cytoplasm
A0036064cellular_componentciliary basal body
A0043495molecular_functionprotein-membrane adaptor activity
A0044297cellular_componentcell body
A0050811molecular_functionGABA receptor binding
A0061723biological_processglycophagy
A0061753biological_processsubstrate localization to autophagosome
A0097352biological_processautophagosome maturation
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue GOL A 201
ChainResidue
ALYS6
APHE11
AARG14

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsPropeptide: {"description":"Removed in mature form","featureId":"PRO_0000420209","evidences":[{"source":"PubMed","id":"16704426","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsSite: {"description":"Cleavage; by ATG4B","evidences":[{"source":"PubMed","id":"16704426","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsLipidation: {"description":"Phosphatidylserine amidated glycine; alternate","evidences":[{"source":"UniProtKB","id":"Q9H0R8","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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