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5YCC

Crystal structure of Notothenia coriiceps adenylate kinase variant

Functional Information from GO Data
ChainGOidnamespacecontents
A0004017molecular_functionadenylate kinase activity
A0004127molecular_function(d)CMP kinase activity
A0004550molecular_functionnucleoside diphosphate kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006139biological_processnucleobase-containing compound metabolic process
A0006172biological_processADP biosynthetic process
A0009142biological_processnucleoside triphosphate biosynthetic process
A0016301molecular_functionkinase activity
A0019205molecular_functionnucleobase-containing compound kinase activity
A0046033biological_processAMP metabolic process
A0046034biological_processATP metabolic process
A0046899molecular_functionnucleoside triphosphate adenylate kinase activity
A0046940biological_processnucleoside monophosphate phosphorylation
B0004017molecular_functionadenylate kinase activity
B0004127molecular_function(d)CMP kinase activity
B0004550molecular_functionnucleoside diphosphate kinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006139biological_processnucleobase-containing compound metabolic process
B0006172biological_processADP biosynthetic process
B0009142biological_processnucleoside triphosphate biosynthetic process
B0016301molecular_functionkinase activity
B0019205molecular_functionnucleobase-containing compound kinase activity
B0046033biological_processAMP metabolic process
B0046034biological_processATP metabolic process
B0046899molecular_functionnucleoside triphosphate adenylate kinase activity
B0046940biological_processnucleoside monophosphate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues27
Detailsbinding site for residue AP5 A 201
ChainResidue
AGLY16
AGLY40
ALEU43
AARG44
AMET61
AGLU65
ALEU66
AVAL67
AGLY94
ATYR95
AARG97
APRO17
AGLN101
AARG128
AARG132
AARG138
AARG149
ALEU177
AVAL179
AHOH301
AGLY18
ASER19
AGLY20
ALYS21
AGLY22
ATHR23
ASER39

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 202
ChainResidue
AARG53
AASP74
AASP78
BARG138
BALA139

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 203
ChainResidue
APRO68
ALEU69
AGLU98
AHOH307

site_idAC4
Number of Residues27
Detailsbinding site for residue AP5 B 201
ChainResidue
BPRO17
BGLY18
BSER19
BGLY20
BLYS21
BGLY22
BTHR23
BSER39
BGLY40
BLEU43
BARG44
BMET61
BGLU65
BLEU66
BVAL67
BGLY94
BTYR95
BARG97
BGLN101
BARG128
BARG132
BARG138
BARG149
BSER175
BLEU177
BVAL179
BHOH304

Functional Information from PROSITE/UniProt
site_idPS00113
Number of Residues12
DetailsADENYLATE_KINASE Adenylate kinase signature. YLIDGYPRevkQ
ChainResidueDetails
ATYR90-GLN101

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PDB entries from 2024-07-24

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