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5YC6

The crystal structure of uPA in complex with 4-Bromobenzylamirne at pH4.6

Replaces:  4JNI
Functional Information from GO Data
ChainGOidnamespacecontents
U0004252molecular_functionserine-type endopeptidase activity
U0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue PZH U 301
ChainResidue
UASP189
USO4302
UHOH474
UHOH493
UHOH516
USER190
UCYS191
UGLN192
USER195
UTRP215
UGLY219
UCYS220
UGLY226

site_idAC2
Number of Residues9
Detailsbinding site for residue SO4 U 302
ChainResidue
UHIS57
UGLN192
UGLY193
USER195
UPZH301
UHOH409
UHOH460
UHOH484
UHOH552

site_idAC3
Number of Residues7
Detailsbinding site for residue PGE U 303
ChainResidue
ULEU162
UALA184
UASP185
UPRO185
UTRP186
UHOH525
UHOH532

site_idAC4
Number of Residues4
Detailsbinding site for residue PGE U 304
ChainResidue
UVAL38
UASN74
USER135
USER202

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. ISATHC
ChainResidueDetails
UILE53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPLV
ChainResidueDetails
UASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
UHIS57
UASP102
USER195

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:9151681
ChainResidueDetails
USER146

site_idSWS_FT_FI3
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine
ChainResidueDetails
UGLN145

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PDB entries from 2024-07-24

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