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5Y3E

Crystal structure of SARS coronavirus papain-like protease in complex with glycerol

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS190
ACYS193
ACYS225
ACYS227

site_idAC2
Number of Residues4
Detailsbinding site for residue NA A 402
ChainResidue
ALYS218
ALEU235
ATYR311
ATHR313

site_idAC3
Number of Residues4
Detailsbinding site for residue NA A 403
ChainResidue
AALA262
AASN263
AHIS276
ASER116

site_idAC4
Number of Residues5
Detailsbinding site for residue NA A 404
ChainResidue
ASER115
ALEU119
AILE286
AGLY288
AHOH530

site_idAC5
Number of Residues4
Detailsbinding site for residue NA A 405
ChainResidue
ATYR72
AALA132
AASN147
AHOH678

site_idAC6
Number of Residues6
Detailsbinding site for residue NA A 406
ChainResidue
AARG184
AVAL206
AMET207
ATYR208
AMET244
AMET245

site_idAC7
Number of Residues7
Detailsbinding site for residue GOL A 407
ChainResidue
ATYR252
ALYS253
ALEU254
AGLN255
ATHR258
ATYR306
AHOH505

site_idAC8
Number of Residues8
Detailsbinding site for residue GOL A 408
ChainResidue
AASP165
APRO249
ATYR265
ATYR274
AGLU281
ATHR302
AHOH561
AHOH596

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL A 409
ChainResidue
ATRP107
AASN110
ACYS112
AGLY272
AHIS273

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues37
DetailsZN_FING: C4-type => ECO:0000255|PROSITE-ProRule:PRU00444, ECO:0000269|PubMed:16306590
ChainResidueDetails
ACYS190-CYS227

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: For PL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00444
ChainResidueDetails
ACYS112

site_idSWS_FT_FI3
Number of Residues2
DetailsACT_SITE: For PL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00444, ECO:0000269|PubMed:16306590
ChainResidueDetails
AHIS273
AASP287

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00444
ChainResidueDetails
ACYS190
ACYS193
ACYS225
ACYS227

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PDB entries from 2024-10-09

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