5XV0
Crystal structure of Rib7 mutant D33N from Methanosarcina mazei
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
| A | 0009231 | biological_process | riboflavin biosynthetic process |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0050661 | molecular_function | NADP binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
| B | 0009231 | biological_process | riboflavin biosynthetic process |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0050661 | molecular_function | NADP binding |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
| C | 0009231 | biological_process | riboflavin biosynthetic process |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0050661 | molecular_function | NADP binding |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
| D | 0009231 | biological_process | riboflavin biosynthetic process |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0050661 | molecular_function | NADP binding |
| E | 0000166 | molecular_function | nucleotide binding |
| E | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
| E | 0009231 | biological_process | riboflavin biosynthetic process |
| E | 0016491 | molecular_function | oxidoreductase activity |
| E | 0050661 | molecular_function | NADP binding |
| F | 0000166 | molecular_function | nucleotide binding |
| F | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
| F | 0009231 | biological_process | riboflavin biosynthetic process |
| F | 0016491 | molecular_function | oxidoreductase activity |
| F | 0050661 | molecular_function | NADP binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 28 |
| Details | binding site for residue NAP A 301 |
| Chain | Residue |
| A | ALA11 |
| A | ASP57 |
| A | VAL86 |
| A | ASP87 |
| A | SER88 |
| A | ARG91 |
| A | ALA133 |
| A | ARG135 |
| A | VAL136 |
| A | LEU138 |
| A | GLU156 |
| A | LEU18 |
| A | GLY157 |
| A | GLY158 |
| A | ALA159 |
| A | THR160 |
| A | LEU161 |
| A | GLY164 |
| A | HOH407 |
| A | HOH411 |
| A | HOH438 |
| A | SER19 |
| A | ARG23 |
| A | GLY50 |
| A | ILE51 |
| A | GLY52 |
| A | THR53 |
| A | ALA56 |
| site_id | AC2 |
| Number of Residues | 25 |
| Details | binding site for residue NAP B 301 |
| Chain | Residue |
| A | HIS-6 |
| A | HIS-3 |
| B | SER10 |
| B | ALA11 |
| B | LEU18 |
| B | SER19 |
| B | ARG23 |
| B | GLY50 |
| B | ILE51 |
| B | GLY52 |
| B | THR53 |
| B | ASP57 |
| B | VAL86 |
| B | SER88 |
| B | ARG91 |
| B | ARG135 |
| B | VAL136 |
| B | LEU138 |
| B | GLU156 |
| B | GLY158 |
| B | ALA159 |
| B | THR160 |
| B | LEU161 |
| B | HOH405 |
| B | HOH442 |
| site_id | AC3 |
| Number of Residues | 21 |
| Details | binding site for residue NAP C 301 |
| Chain | Residue |
| C | ALA11 |
| C | LEU18 |
| C | SER19 |
| C | ARG23 |
| C | GLY50 |
| C | ILE51 |
| C | GLY52 |
| C | THR53 |
| C | ASP57 |
| C | VAL86 |
| C | SER88 |
| C | ARG91 |
| C | ARG135 |
| C | VAL136 |
| C | LEU138 |
| C | GLU156 |
| C | GLY158 |
| C | ALA159 |
| C | THR160 |
| C | LEU161 |
| C | GLY164 |
| site_id | AC4 |
| Number of Residues | 22 |
| Details | binding site for residue NAP D 301 |
| Chain | Residue |
| D | SER10 |
| D | ALA11 |
| D | LEU18 |
| D | SER19 |
| D | ARG23 |
| D | GLN25 |
| D | GLY50 |
| D | GLY52 |
| D | THR53 |
| D | ASP57 |
| D | VAL86 |
| D | SER88 |
| D | ARG91 |
| D | ARG135 |
| D | VAL136 |
| D | GLY157 |
| D | GLY158 |
| D | ALA159 |
| D | THR160 |
| D | LEU161 |
| D | GLY164 |
| D | HOH424 |
| site_id | AC5 |
| Number of Residues | 26 |
| Details | binding site for residue NAP E 301 |
| Chain | Residue |
| E | SER19 |
| E | ARG23 |
| E | GLY50 |
| E | ILE51 |
| E | GLY52 |
| E | THR53 |
| E | ASP57 |
| E | VAL86 |
| E | SER88 |
| E | ARG91 |
| E | VAL136 |
| E | LEU138 |
| E | GLU156 |
| E | GLY158 |
| E | ALA159 |
| E | THR160 |
| E | LEU161 |
| E | HOH410 |
| E | HOH446 |
| E | HOH502 |
| E | HOH505 |
| F | HIS-3 |
| F | HIS-6 |
| E | SER10 |
| E | ALA11 |
| E | LEU18 |
| site_id | AC6 |
| Number of Residues | 25 |
| Details | binding site for residue NAP F 301 |
| Chain | Residue |
| F | ALA11 |
| F | LEU18 |
| F | SER19 |
| F | ARG23 |
| F | GLY50 |
| F | ILE51 |
| F | GLY52 |
| F | THR53 |
| F | ASP57 |
| F | VAL86 |
| F | ASP87 |
| F | SER88 |
| F | ARG91 |
| F | ALA133 |
| F | VAL136 |
| F | LEU138 |
| F | GLU156 |
| F | GLY157 |
| F | GLY158 |
| F | ALA159 |
| F | THR160 |
| F | LEU161 |
| F | GLY164 |
| F | HOH412 |
| F | HOH501 |
