Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5XRZ

Structure of a ssDNA bound to the inner DNA binding site of RAD52

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000724	biological_process	double-strand break repair via homologous recombination
A	0000730	biological_process	DNA recombinase assembly
A	0005634	cellular_component	nucleus
A	0006281	biological_process	DNA repair
A	0006310	biological_process	DNA recombination
A	0045002	biological_process	double-strand break repair via single-strand annealing
B	0000724	biological_process	double-strand break repair via homologous recombination
B	0000730	biological_process	DNA recombinase assembly
B	0005634	cellular_component	nucleus
B	0006281	biological_process	DNA repair
B	0006310	biological_process	DNA recombination
B	0045002	biological_process	double-strand break repair via single-strand annealing
C	0000724	biological_process	double-strand break repair via homologous recombination
C	0000730	biological_process	DNA recombinase assembly
C	0005634	cellular_component	nucleus
C	0006281	biological_process	DNA repair
C	0006310	biological_process	DNA recombination
C	0045002	biological_process	double-strand break repair via single-strand annealing
D	0000724	biological_process	double-strand break repair via homologous recombination
D	0000730	biological_process	DNA recombinase assembly
D	0005634	cellular_component	nucleus
D	0006281	biological_process	DNA repair
D	0006310	biological_process	DNA recombination
D	0045002	biological_process	double-strand break repair via single-strand annealing
E	0000724	biological_process	double-strand break repair via homologous recombination
E	0000730	biological_process	DNA recombinase assembly
E	0005634	cellular_component	nucleus
E	0006281	biological_process	DNA repair
E	0006310	biological_process	DNA recombination
E	0045002	biological_process	double-strand break repair via single-strand annealing
F	0000724	biological_process	double-strand break repair via homologous recombination
F	0000730	biological_process	DNA recombinase assembly
F	0005634	cellular_component	nucleus
F	0006281	biological_process	DNA repair
F	0006310	biological_process	DNA recombination
F	0045002	biological_process	double-strand break repair via single-strand annealing
G	0000724	biological_process	double-strand break repair via homologous recombination
G	0000730	biological_process	DNA recombinase assembly
G	0005634	cellular_component	nucleus
G	0006281	biological_process	DNA repair
G	0006310	biological_process	DNA recombination
G	0045002	biological_process	double-strand break repair via single-strand annealing
H	0000724	biological_process	double-strand break repair via homologous recombination
H	0000730	biological_process	DNA recombinase assembly
H	0005634	cellular_component	nucleus
H	0006281	biological_process	DNA repair
H	0006310	biological_process	DNA recombination
H	0045002	biological_process	double-strand break repair via single-strand annealing
I	0000724	biological_process	double-strand break repair via homologous recombination
I	0000730	biological_process	DNA recombinase assembly
I	0005634	cellular_component	nucleus
I	0006281	biological_process	DNA repair
I	0006310	biological_process	DNA recombination
I	0045002	biological_process	double-strand break repair via single-strand annealing
J	0000724	biological_process	double-strand break repair via homologous recombination
J	0000730	biological_process	DNA recombinase assembly
J	0005634	cellular_component	nucleus
J	0006281	biological_process	DNA repair
J	0006310	biological_process	DNA recombination
J	0045002	biological_process	double-strand break repair via single-strand annealing
K	0000724	biological_process	double-strand break repair via homologous recombination
K	0000730	biological_process	DNA recombinase assembly
K	0005634	cellular_component	nucleus
K	0006281	biological_process	DNA repair
K	0006310	biological_process	DNA recombination
K	0045002	biological_process	double-strand break repair via single-strand annealing

Functional Information from PDB Data

site_id	AC1
Number of Residues	1
Details	binding site for residue K A 301

Chain	Residue
A	GLU140

site_id	AC2
Number of Residues	2
Details	binding site for residue K B 301

Chain	Residue
B	GLU140
C	GLU145

site_id	AC3
Number of Residues	2
Details	binding site for residue K C 301

Chain	Residue
C	GLU140
L	DT12

site_id	AC4
Number of Residues	4
Details	binding site for residue K D 301

Chain	Residue
D	GLU140
E	GLU145
L	DT16
L	DT17

site_id	AC5
Number of Residues	2
Details	binding site for residue K E 301

Chain	Residue
E	GLU140
F	GLU145

site_id	AC6
Number of Residues	2
Details	binding site for residue K F 301

Chain	Residue
F	GLU140
L	DT25

site_id	AC7
Number of Residues	1
Details	binding site for residue K G 301

Chain	Residue
G	GLU140

site_id	AC8
Number of Residues	2
Details	binding site for residue K H 301

Chain	Residue
H	GLU140
I	GLU145

site_id	AC9
Number of Residues	3
Details	binding site for residue K I 301

Chain	Residue
I	GLU140
J	GLU145
L	DT37

site_id	AD1
Number of Residues	2
Details	binding site for residue K K 301

Chain	Residue
K	GLU140
L	DT1

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	44
Details	DNA_BIND:

Chain	Residue	Details
A	LYS152-ARG156
J	LYS152-ARG156
K	LYS152-ARG156
B	LYS152-ARG156
C	LYS152-ARG156
D	LYS152-ARG156
E	LYS152-ARG156
F	LYS152-ARG156
G	LYS152-ARG156
H	LYS152-ARG156
I	LYS152-ARG156

site_id	SWS_FT_FI2
Number of Residues	11
Details	MOD_RES: Phosphotyrosine; by ABL1 => ECO:0000269\|PubMed:12379650

Chain	Residue	Details
A	TYR104
J	TYR104
K	TYR104
B	TYR104
C	TYR104
D	TYR104
E	TYR104
F	TYR104
G	TYR104
H	TYR104
I	TYR104

site_id	SWS_FT_FI3
Number of Residues	11
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:18691976

Chain	Residue	Details
A	SER199
J	SER199
K	SER199
B	SER199
C	SER199
D	SER199
E	SER199
F	SER199
G	SER199
H	SER199
I	SER199

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)