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5XDR

Crystal structure of human DEAH-box RNA helicase DHX15 in complex with ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003724molecular_functionRNA helicase activity
A0005524molecular_functionATP binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue ADP A 801
ChainResidue
ATHR162
APHE401
AASP431
AARG475
AMG804
AHOH904
AHOH922
AGLY163
ASER164
AGLY165
ALYS166
ATHR167
ATHR168
ASER200
AARG204

site_idAC2
Number of Residues2
Detailsbinding site for residue SO4 A 802
ChainResidue
AARG602
ALYS607

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 803
ChainResidue
ALYS691
ALYS754
ATRP757
AHOH944

site_idAC4
Number of Residues7
Detailsbinding site for residue MG A 804
ChainResidue
ATHR167
AASP260
AADP801
AHOH904
AHOH922
AHOH926
AHOH936

Functional Information from PROSITE/UniProt
site_idPS00690
Number of Residues10
DetailsDEAH_ATP_HELICASE DEAH-box subfamily ATP-dependent helicases signature. GvIILDEAHE
ChainResidueDetails
AGLY255-GLU264

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues166
DetailsDomain: {"description":"Helicase ATP-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues180
DetailsDomain: {"description":"Helicase C-terminal","evidences":[{"source":"PROSITE-ProRule","id":"PRU00542","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsMotif: {"description":"DEAH box"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

240971

PDB entries from 2025-08-27

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