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5X1M

Vanillate/3-O-methylgallate O-demethylase, LigM, protocatechuate-tetrahydrofolate complex form

Functional Information from GO Data
ChainGOidnamespacecontents
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
A0046274biological_processlignin catabolic process
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
B0046274biological_processlignin catabolic process
C0008168molecular_functionmethyltransferase activity
C0032259biological_processmethylation
C0046274biological_processlignin catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue DHB A 501
ChainResidue
ATYR31
AHOH614
AHOH654
AHIS60
AMET61
AARG122
ATYR247
AASN250
ATRP256
APRO258
AHOH604

site_idAC2
Number of Residues6
Detailsbinding site for residue DHB A 502
ChainResidue
ASER291
APHE292
AVAL293
AVAL387
ALEU422
AHOH657

site_idAC3
Number of Residues9
Detailsbinding site for residue TRS A 503
ChainResidue
AGLY428
ATHR430
AARG431
ALYS432
AVAL435
AGLU436
APRO437
AHOH603
AHOH659

site_idAC4
Number of Residues6
Detailsbinding site for residue TRS A 504
ChainResidue
AGLN57
AMET61
AILE108
AVAL120
AGLU215
AHOH667

site_idAC5
Number of Residues14
Detailsbinding site for residue THG B 501
ChainResidue
BGLN57
BMET61
BLYS92
BGLN93
BILE108
BPHE110
BVAL120
BGLN165
BPHE188
BPHE189
BGLU215
BTRP256
BPHE312
BDHB502

site_idAC6
Number of Residues10
Detailsbinding site for residue DHB B 502
ChainResidue
BTYR31
BHIS60
BMET61
BARG122
BTYR247
BASN250
BTRP256
BPRO258
BTHG501
BHOH643

site_idAC7
Number of Residues8
Detailsbinding site for residue TRS B 503
ChainResidue
BGLY428
BTHR430
BARG431
BLYS432
BVAL435
BGLU436
BPRO437
BHOH658

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO B 504
ChainResidue
AGLU232
BTYR100
BGLY267
BASP268
BLYS269

site_idAC9
Number of Residues12
Detailsbinding site for residue THG C 501
ChainResidue
CGLN57
CMET61
CLYS90
CGLN93
CILE108
CVAL120
CGLN165
CPHE189
CGLU215
CTRP256
CPHE312
CHOH601

site_idAD1
Number of Residues10
Detailsbinding site for residue DHB C 502
ChainResidue
CTYR31
CHIS60
CMET61
CARG122
CTYR247
CASN250
CTRP256
CPRO258
CHOH601
CHOH602

site_idAD2
Number of Residues6
Detailsbinding site for residue TRS C 503
ChainResidue
CGLY428
CGLY429
CTHR430
CARG431
CLYS432
CVAL435

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues30
DetailsBINDING: BINDING => ECO:0000269|PubMed:28429420
ChainResidueDetails
ATYR31
ATRP256
BTYR31
BGLN57
BHIS60
BGLN93
BVAL120
BARG122
BGLN165
BGLU215
BTYR247
AGLN57
BTRP256
CTYR31
CGLN57
CHIS60
CGLN93
CVAL120
CARG122
CGLN165
CGLU215
CTYR247
AHIS60
CTRP256
AGLN93
AVAL120
AARG122
AGLN165
AGLU215
ATYR247

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Important for activity => ECO:0000305|PubMed:28429420
ChainResidueDetails
AHIS60
BHIS60
CHIS60

site_idSWS_FT_FI3
Number of Residues3
DetailsSITE: Important for activity => ECO:0000305|PubMed:28373573, ECO:0000305|PubMed:28429420
ChainResidueDetails
ATYR247
BTYR247
CTYR247

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PDB entries from 2024-07-24

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