5WY6
Crystal structure of AtNUDX1 (E56A)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000210 | molecular_function | NAD+ diphosphatase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0006203 | biological_process | dGTP catabolic process |
| A | 0006950 | biological_process | response to stress |
| A | 0006974 | biological_process | DNA damage response |
| A | 0008413 | molecular_function | 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0019177 | molecular_function | dihydroneopterin triphosphate pyrophosphohydrolase activity |
| A | 0035529 | molecular_function | NADH pyrophosphatase activity |
| A | 0035539 | molecular_function | 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity |
| A | 0046872 | molecular_function | metal ion binding |
| E | 0000210 | molecular_function | NAD+ diphosphatase activity |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0005829 | cellular_component | cytosol |
| E | 0006203 | biological_process | dGTP catabolic process |
| E | 0006950 | biological_process | response to stress |
| E | 0006974 | biological_process | DNA damage response |
| E | 0008413 | molecular_function | 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity |
| E | 0016787 | molecular_function | hydrolase activity |
| E | 0019177 | molecular_function | dihydroneopterin triphosphate pyrophosphohydrolase activity |
| E | 0035529 | molecular_function | NADH pyrophosphatase activity |
| E | 0035539 | molecular_function | 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity |
| E | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue PEG E 201 |
| Chain | Residue |
| A | TRP119 |
| A | GLU120 |
| A | ASN139 |
| E | TRP119 |
| E | ASN139 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue GOL E 202 |
| Chain | Residue |
| E | LYS124 |
| A | ARG28 |
| A | ASN33 |
| A | GLU112 |
| A | HOH310 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 201 |
| Chain | Residue |
| A | GLU66 |
| A | LYS67 |
| A | MET68 |
| E | LYS132 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue PEG A 202 |
| Chain | Residue |
| A | HOH322 |
| E | TRP119 |
| E | LEU122 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue PEG A 203 |
| Chain | Residue |
| A | TRP119 |
| A | PHE134 |
| A | HOH302 |
| A | HOH317 |
| E | ASN20 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue GOL A 204 |
| Chain | Residue |
| A | PRO123 |
| A | LYS124 |
| E | ARG28 |
| E | ASN33 |
| E | GLU112 |
| E | HOH310 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 266 |
| Details | Domain: {"description":"Nudix hydrolase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00794","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 42 |
| Details | Motif: {"description":"Nudix box"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
