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5WTP

Crystal structure of the C-terminal domain of outer membrane protein A (OmpA) from Capnocytophaga gingivalis

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
B0016020cellular_componentmembrane
C0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue SO4 A 501
ChainResidue
ALYS440
AARG443
AARG447
AHOH613
AHOH628
AHOH634
CTHR392
CGLY393

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 502
ChainResidue
AGLY356
ALEU401
AARG405
AHOH602
ATHR355

site_idAC3
Number of Residues6
Detailsbinding site for residue SO4 A 503
ChainResidue
AASP337
AGLU338
AASN439
AHOH604
AHOH612
AHOH643

site_idAC4
Number of Residues8
Detailsbinding site for residue SO4 A 504
ChainResidue
AGLU333
AASN439
ALYS440
AHOH604
AHOH610
AHOH623
AHOH626
AHOH637

site_idAC5
Number of Residues7
Detailsbinding site for residue SO4 A 505
ChainResidue
ASER436
AASN437
ASO4510
AHOH603
AHOH620
AHOH629
AHOH646

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 506
ChainResidue
AARG384
ALEU453
BPRO433
BASN437

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 A 507
ChainResidue
ALEU352
AARG447
AHOH636
AHOH658
CLYS394

site_idAC8
Number of Residues2
Detailsbinding site for residue SO4 A 508
ChainResidue
AALA435
ASER436

site_idAC9
Number of Residues5
Detailsbinding site for residue SO4 A 509
ChainResidue
AGLY417
AILE418
AASP419
AARG422
AHOH650

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 A 510
ChainResidue
APRO430
AASN437
ASO4505
AHOH611

site_idAD2
Number of Residues3
Detailsbinding site for residue SO4 A 511
ChainResidue
ALYS361
APHE362
AGLN363

site_idAD3
Number of Residues4
Detailsbinding site for residue SO4 B 501
ChainResidue
BTHR355
BGLY356
BARG405
BARG447

site_idAD4
Number of Residues2
Detailsbinding site for residue SO4 B 502
ChainResidue
BARG443
BARG447

site_idAD5
Number of Residues6
Detailsbinding site for residue SO4 B 503
ChainResidue
ALYS410
AGLU424
ASER425
BGLN403
BGLU431
BHOH601

site_idAD6
Number of Residues3
Detailsbinding site for residue SO4 B 504
ChainResidue
AGLU431
BASN345
BHOH639

site_idAD7
Number of Residues4
Detailsbinding site for residue SO4 B 505
ChainResidue
BGLY417
BILE418
BASP419
BARG422

site_idAD8
Number of Residues4
Detailsbinding site for residue SO4 B 506
ChainResidue
BTHR392
BGLY393
BHOH616
BHOH641

site_idAD9
Number of Residues2
Detailsbinding site for residue SO4 B 507
ChainResidue
BLYS394
BLYS395

site_idAE1
Number of Residues1
Detailsbinding site for residue SO4 B 508
ChainResidue
BARG447

site_idAE2
Number of Residues4
Detailsbinding site for residue SO4 B 509
ChainResidue
BARG384
BARG384
BGLU424
BGLU424

site_idAE3
Number of Residues10
Detailsbinding site for residue SO4 C 501
ChainResidue
AGLU333
APHE334
AGLU335
AHOH609
AHOH618
AHOH623
CSER436
CASN437
CLYS438
CHOH620

site_idAE4
Number of Residues8
Detailsbinding site for residue SO4 C 502
ChainResidue
CLYS440
CARG443
CARG447
CHOH612
CHOH615
CHOH631
ATHR392
AGLY393

site_idAE5
Number of Residues5
Detailsbinding site for residue SO4 C 503
ChainResidue
AHOH646
CASN439
CLYS440
CHOH619
CHOH626

site_idAE6
Number of Residues6
Detailsbinding site for residue SO4 C 504
ChainResidue
CTHR355
CGLY356
CARG405
CARG447
CHOH632
CHOH639

site_idAE7
Number of Residues2
Detailsbinding site for residue SO4 C 505
ChainResidue
CASP337
CGLU338

site_idAE8
Number of Residues9
Detailsbinding site for residue SO4 C 506
ChainResidue
CILE351
CPHE353
CARG405
CARG447
CARG448
CVAL449
CSO4509
CHOH601
CHOH611

site_idAE9
Number of Residues3
Detailsbinding site for residue SO4 C 507
ChainResidue
CLYS361
CPHE362
CGLN363

site_idAF1
Number of Residues4
Detailsbinding site for residue SO4 C 508
ChainResidue
ALYS440
CGLY393
CLYS395
CHOH608

site_idAF2
Number of Residues3
Detailsbinding site for residue SO4 C 509
ChainResidue
CLEU352
CARG447
CSO4506

Functional Information from PROSITE/UniProt
site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KyPNSRfR
ChainResidueDetails
ALYS377-ARG384

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PDB entries from 2024-11-06

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