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5WSK

Structure of Ribulose-1,5-bisphosphate carboxylase/oxygenase from wheat

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004497molecular_functionmonooxygenase activity
A0009507cellular_componentchloroplast
A0009853biological_processphotorespiration
A0015977biological_processcarbon fixation
A0015979biological_processphotosynthesis
A0016829molecular_functionlyase activity
A0016984molecular_functionribulose-bisphosphate carboxylase activity
A0019253biological_processreductive pentose-phosphate cycle
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0004497molecular_functionmonooxygenase activity
B0009507cellular_componentchloroplast
B0009853biological_processphotorespiration
B0015977biological_processcarbon fixation
B0015979biological_processphotosynthesis
B0016829molecular_functionlyase activity
B0016984molecular_functionribulose-bisphosphate carboxylase activity
B0019253biological_processreductive pentose-phosphate cycle
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0004497molecular_functionmonooxygenase activity
C0009507cellular_componentchloroplast
C0009853biological_processphotorespiration
C0015977biological_processcarbon fixation
C0015979biological_processphotosynthesis
C0016829molecular_functionlyase activity
C0016984molecular_functionribulose-bisphosphate carboxylase activity
C0019253biological_processreductive pentose-phosphate cycle
C0046872molecular_functionmetal ion binding
D0000287molecular_functionmagnesium ion binding
D0004497molecular_functionmonooxygenase activity
D0009507cellular_componentchloroplast
D0009853biological_processphotorespiration
D0015977biological_processcarbon fixation
D0015979biological_processphotosynthesis
D0016829molecular_functionlyase activity
D0016984molecular_functionribulose-bisphosphate carboxylase activity
D0019253biological_processreductive pentose-phosphate cycle
D0046872molecular_functionmetal ion binding
E0009507cellular_componentchloroplast
E0009853biological_processphotorespiration
E0015977biological_processcarbon fixation
E0015979biological_processphotosynthesis
E0016984molecular_functionribulose-bisphosphate carboxylase activity
E0019253biological_processreductive pentose-phosphate cycle
F0009507cellular_componentchloroplast
F0009853biological_processphotorespiration
F0015977biological_processcarbon fixation
F0015979biological_processphotosynthesis
F0016984molecular_functionribulose-bisphosphate carboxylase activity
F0019253biological_processreductive pentose-phosphate cycle
G0009507cellular_componentchloroplast
G0009853biological_processphotorespiration
G0015977biological_processcarbon fixation
G0015979biological_processphotosynthesis
G0016984molecular_functionribulose-bisphosphate carboxylase activity
G0019253biological_processreductive pentose-phosphate cycle
H0009507cellular_componentchloroplast
H0009853biological_processphotorespiration
H0015977biological_processcarbon fixation
H0015979biological_processphotosynthesis
H0016984molecular_functionribulose-bisphosphate carboxylase activity
H0019253biological_processreductive pentose-phosphate cycle
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 501
ChainResidue
AKCX201
AASP203
AGLU204
AHOH624
AHOH644
AHOH826

site_idAC2
Number of Residues5
Detailsbinding site for residue MG B 501
ChainResidue
BHOH748
BHOH787
BKCX201
BASP203
BGLU204

site_idAC3
Number of Residues6
Detailsbinding site for residue MG C 501
ChainResidue
CKCX201
CASP203
CGLU204
CHOH638
CHOH647
CHOH839

site_idAC4
Number of Residues6
Detailsbinding site for residue MG D 501
ChainResidue
DKCX201
DASP203
DGLU204
DHOH617
DHOH753
DHOH851

Functional Information from PROSITE/UniProt
site_idPS00157
Number of Residues9
DetailsRUBISCO_LARGE Ribulose bisphosphate carboxylase large chain active site. GlDFtKdDE
ChainResidueDetails
AGLY196-GLU204

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsACT_SITE: Proton acceptor => ECO:0000250
ChainResidueDetails
ALYS175
AHIS294
BLYS175
BHIS294
CLYS175
CHIS294
DLYS175
DHIS294

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: in homodimeric partner => ECO:0000250
ChainResidueDetails
AASN123
BASN123
CASN123
DASN123

site_idSWS_FT_FI3
Number of Residues28
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ATHR173
BASP203
BGLU204
BARG295
BHIS327
BSER379
CTHR173
CLYS177
CASP203
CGLU204
CARG295
ALYS177
CHIS327
CSER379
DTHR173
DLYS177
DASP203
DGLU204
DARG295
DHIS327
DSER379
AASP203
AGLU204
AARG295
AHIS327
ASER379
BTHR173
BLYS177

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: via carbamate group => ECO:0000250
ChainResidueDetails
AKCX201
BKCX201
CKCX201
DKCX201

site_idSWS_FT_FI5
Number of Residues4
DetailsSITE: Not N6-methylated => ECO:0000269|PubMed:2928307
ChainResidueDetails
ALYS14
BLYS14
CLYS14
DLYS14

site_idSWS_FT_FI6
Number of Residues4
DetailsSITE: Transition state stabilizer => ECO:0000250
ChainResidueDetails
ALYS334
BLYS334
CLYS334
DLYS334

site_idSWS_FT_FI7
Number of Residues4
DetailsMOD_RES: N-acetylproline => ECO:0000269|PubMed:2928307
ChainResidueDetails
APRO3
BPRO3
CPRO3
DPRO3

site_idSWS_FT_FI8
Number of Residues4
DetailsMOD_RES: N6-carboxylysine => ECO:0000250
ChainResidueDetails
AKCX201
BKCX201
CKCX201
DKCX201

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PDB entries from 2024-09-18

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