5W74
Crystal Structure of the Group II Chaperonin from Methanococcus Maripaludis D386ADeltaLid Mutant in the Open, ADP-Bound State
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005832 | cellular_component | chaperonin-containing T-complex |
A | 0006457 | biological_process | protein folding |
A | 0016887 | molecular_function | ATP hydrolysis activity |
A | 0042802 | molecular_function | identical protein binding |
A | 0046872 | molecular_function | metal ion binding |
A | 0051082 | molecular_function | unfolded protein binding |
A | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
B | 0000166 | molecular_function | nucleotide binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005832 | cellular_component | chaperonin-containing T-complex |
B | 0006457 | biological_process | protein folding |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0042802 | molecular_function | identical protein binding |
B | 0046872 | molecular_function | metal ion binding |
B | 0051082 | molecular_function | unfolded protein binding |
B | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
C | 0000166 | molecular_function | nucleotide binding |
C | 0005524 | molecular_function | ATP binding |
C | 0005832 | cellular_component | chaperonin-containing T-complex |
C | 0006457 | biological_process | protein folding |
C | 0016887 | molecular_function | ATP hydrolysis activity |
C | 0042802 | molecular_function | identical protein binding |
C | 0046872 | molecular_function | metal ion binding |
C | 0051082 | molecular_function | unfolded protein binding |
C | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
D | 0000166 | molecular_function | nucleotide binding |
D | 0005524 | molecular_function | ATP binding |
D | 0005832 | cellular_component | chaperonin-containing T-complex |
D | 0006457 | biological_process | protein folding |
D | 0016887 | molecular_function | ATP hydrolysis activity |
D | 0042802 | molecular_function | identical protein binding |
D | 0046872 | molecular_function | metal ion binding |
D | 0051082 | molecular_function | unfolded protein binding |
D | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
E | 0000166 | molecular_function | nucleotide binding |
E | 0005524 | molecular_function | ATP binding |
E | 0005832 | cellular_component | chaperonin-containing T-complex |
E | 0006457 | biological_process | protein folding |
E | 0016887 | molecular_function | ATP hydrolysis activity |
E | 0042802 | molecular_function | identical protein binding |
E | 0046872 | molecular_function | metal ion binding |
E | 0051082 | molecular_function | unfolded protein binding |
E | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
F | 0000166 | molecular_function | nucleotide binding |
F | 0005524 | molecular_function | ATP binding |
F | 0005832 | cellular_component | chaperonin-containing T-complex |
F | 0006457 | biological_process | protein folding |
F | 0016887 | molecular_function | ATP hydrolysis activity |
F | 0042802 | molecular_function | identical protein binding |
F | 0046872 | molecular_function | metal ion binding |
F | 0051082 | molecular_function | unfolded protein binding |
F | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
G | 0000166 | molecular_function | nucleotide binding |
G | 0005524 | molecular_function | ATP binding |
G | 0005832 | cellular_component | chaperonin-containing T-complex |
G | 0006457 | biological_process | protein folding |
G | 0016887 | molecular_function | ATP hydrolysis activity |
G | 0042802 | molecular_function | identical protein binding |
G | 0046872 | molecular_function | metal ion binding |
G | 0051082 | molecular_function | unfolded protein binding |
G | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
H | 0000166 | molecular_function | nucleotide binding |
H | 0005524 | molecular_function | ATP binding |
H | 0005832 | cellular_component | chaperonin-containing T-complex |
H | 0006457 | biological_process | protein folding |
H | 0016887 | molecular_function | ATP hydrolysis activity |
H | 0042802 | molecular_function | identical protein binding |
H | 0046872 | molecular_function | metal ion binding |
H | 0051082 | molecular_function | unfolded protein binding |
H | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 16 |
Details | binding site for residue ADP A 600 |
Chain | Residue |
A | LEU39 |
A | GLY405 |
A | LEU473 |
A | ASN474 |
A | VAL488 |
A | GLU490 |
A | LYS495 |
A | MG601 |
A | GLY40 |
A | ASP91 |
A | GLY92 |
A | THR94 |
A | THR95 |
A | GLY160 |
A | GLY403 |
A | GLY404 |
site_id | AC2 |
Number of Residues | 2 |
Details | binding site for residue MG A 601 |
Chain | Residue |
A | THR94 |
A | ADP600 |
site_id | AC3 |
Number of Residues | 14 |
Details | binding site for residue ADP B 600 |
Chain | Residue |
B | LEU39 |
B | ASP91 |
B | GLY92 |
B | THR93 |
B | THR94 |
B | THR95 |
B | THR156 |
B | GLY160 |
B | GLY403 |
B | GLY404 |
B | VAL488 |
B | GLU490 |
B | LYS495 |
B | MG601 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue MG B 601 |
Chain | Residue |
B | ASP91 |
B | ADP600 |
site_id | AC5 |
Number of Residues | 17 |
Details | binding site for residue ADP C 600 |
Chain | Residue |
C | THR38 |
C | LEU39 |
C | GLY40 |
C | PRO41 |
C | ASP91 |
C | GLY92 |
C | THR93 |
C | THR94 |
C | THR95 |
C | THR156 |
C | THR159 |
C | GLY160 |
C | GLY404 |
C | LEU473 |
C | PHE476 |
C | GLU490 |
C | MG601 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue MG C 601 |
Chain | Residue |
C | ASP91 |
C | SER157 |
C | ADP600 |
site_id | AC7 |
Number of Residues | 14 |
Details | binding site for residue ADP D 600 |
Chain | Residue |
D | LEU39 |
D | GLY40 |
D | PRO41 |
D | ASP91 |
D | GLY92 |
D | THR93 |
D | THR94 |
D | THR95 |
D | THR156 |
D | GLY160 |
D | GLY404 |
D | GLU490 |
D | LYS495 |
D | MG601 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue MG D 601 |
Chain | Residue |
D | ASP91 |
D | SER157 |
D | ADP600 |
site_id | AC9 |
Number of Residues | 15 |
Details | binding site for residue ADP E 600 |
Chain | Residue |
E | LEU39 |
E | GLY40 |
E | PRO41 |
E | ASP91 |
E | GLY92 |
E | THR94 |
E | THR95 |
E | GLY160 |
E | GLY403 |
E | GLY404 |
E | GLY405 |
E | LEU473 |
E | GLU490 |
E | LYS495 |
E | MG601 |
site_id | AD1 |
Number of Residues | 2 |
Details | binding site for residue MG E 601 |
Chain | Residue |
E | ASP91 |
E | ADP600 |
site_id | AD2 |
Number of Residues | 17 |
Details | binding site for residue ADP F 600 |
Chain | Residue |
F | GLY404 |
F | LEU473 |
F | PHE476 |
F | GLU490 |
F | LYS495 |
F | MG601 |
F | THR38 |
F | LEU39 |
F | GLY40 |
F | PRO41 |
F | ASP91 |
F | GLY92 |
F | THR94 |
F | THR95 |
F | THR156 |
F | GLY160 |
F | GLY403 |
site_id | AD3 |
Number of Residues | 3 |
Details | binding site for residue MG F 601 |
Chain | Residue |
F | ASP91 |
F | SER157 |
F | ADP600 |
site_id | AD4 |
Number of Residues | 15 |
Details | binding site for residue ADP G 600 |
Chain | Residue |
G | LEU39 |
G | GLY40 |
G | PRO41 |
G | ASP91 |
G | GLY92 |
G | THR94 |
G | THR95 |
G | GLY160 |
G | GLY403 |
G | GLY404 |
G | LEU473 |
G | VAL488 |
G | GLU490 |
G | LYS495 |
G | MG601 |
site_id | AD5 |
Number of Residues | 2 |
Details | binding site for residue MG G 601 |
Chain | Residue |
G | ASP91 |
G | ADP600 |
site_id | AD6 |
Number of Residues | 18 |
Details | binding site for residue ADP H 600 |
Chain | Residue |
H | THR38 |
H | LEU39 |
H | GLY40 |
H | PRO41 |
H | ASP91 |
H | GLY92 |
H | THR93 |
H | THR94 |
H | THR95 |
H | THR156 |
H | THR159 |
H | GLY160 |
H | GLY404 |
H | PHE476 |
H | VAL488 |
H | GLU490 |
H | LYS495 |
H | MG601 |
site_id | AD7 |
Number of Residues | 3 |
Details | binding site for residue MG H 601 |
Chain | Residue |
H | ASP91 |
H | SER157 |
H | ADP600 |
Functional Information from PROSITE/UniProt
site_id | PS00750 |
Number of Residues | 13 |
Details | TCP1_1 Chaperonins TCP-1 signature 1. RStLGPkGmdKML |
Chain | Residue | Details |
A | ARG36-LEU48 |
site_id | PS00751 |
Number of Residues | 17 |
Details | TCP1_2 Chaperonins TCP-1 signature 2. VTNDGVTILreMsVeHP |
Chain | Residue | Details |
A | VAL57-PRO73 |
site_id | PS00995 |
Number of Residues | 9 |
Details | TCP1_3 Chaperonins TCP-1 signature 3. QEkeVGDGT |
Chain | Residue | Details |
A | GLN85-THR93 |