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5VZI

Post-catalytic complex of human Polymerase Mu (W434H) mutant with incoming dTTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue TTP A 701
ChainResidue
AGLY319
AHOH822
AHOH859
AHOH953
PDT5
PMG101
PHOH207
AGLY320
AARG323
AHIS329
AASP330
AASP332
ATTP702
AMG703
AHOH810

site_idAC2
Number of Residues30
Detailsbinding site for residue TTP A 702
ChainResidue
AGLY319
AGLY320
AARG323
ALYS325
AGLY328
AHIS329
AASP330
AASP332
AGLY433
AHIS434
ATHR435
AGLY436
ALYS438
ATTP701
AMG703
AMG704
ANA706
AHOH810
AHOH816
AHOH826
AHOH859
AHOH887
AHOH985
AHOH1016
PDA4
PDT5
PMG101
PHOH207
PHOH209
TDA5

site_idAC3
Number of Residues8
Detailsbinding site for residue MG A 703
ChainResidue
AASP330
AASP332
ATTP701
ATTP702
AMG704
ANA706
AHOH887
PDT5

site_idAC4
Number of Residues9
Detailsbinding site for residue MG A 704
ChainResidue
AASP330
AASP332
AASP418
ATTP702
AMG703
AHOH921
PDA4
PDT5
PHOH209

site_idAC5
Number of Residues7
Detailsbinding site for residue NA A 705
ChainResidue
ATHR241
AILE243
AVAL246
AHOH1001
PDT3
PDT5
PHOH216

site_idAC6
Number of Residues9
Detailsbinding site for residue NA A 706
ChainResidue
AASP330
AASP332
AASP418
ATTP702
AMG703
AHOH921
PDA4
PDT5
PHOH209

site_idAC7
Number of Residues3
Detailsbinding site for residue EDO A 707
ChainResidue
APHE462
AHOH821
THOH203

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 708
ChainResidue
ATHR288
APRO289
ALEU291
AGLN396
ALYS413
AHOH936

site_idAC9
Number of Residues5
Detailsbinding site for residue EDO A 709
ChainResidue
APRO190
ASER191
APRO192
AGLN198
AHOH922

site_idAD1
Number of Residues8
Detailsbinding site for residue EDO A 710
ChainResidue
AHOH932
AARG387
AVAL420
AVAL421
AHIS434
ASER458
AHIS459
AHOH815

site_idAD2
Number of Residues4
Detailsbinding site for residue MG T 101
ChainResidue
THOH217
THOH220
THOH224
THOH240

site_idAD3
Number of Residues8
Detailsbinding site for residue MG P 101
ChainResidue
AHIS329
ATTP701
ATTP702
AHOH822
PDA4
PDT5
PHOH207
PHOH211

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AASP418

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AGLY433

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PDB entries from 2024-09-11

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